Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq6 102 9e-17 >seq6 Length=1191995 Score = 102 bits (112), Expect = 9e-17 Identities = 120/160 (75%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 |||| ||| ||||| | ||||| || || || ||||| ||||||| ||| ||||| || Sbjct 823393 ACACAAATGGGACCAATCCCAGGTCCACCGCCACCATGAGGAATACCGAAAGTCTTGTGC 823452 Query 138243 AAATTTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 || || | ||||| ||||||||||| | || || || || | | ||| ||||| || Sbjct 823453 AAGTTCAAGTGACAGACATCTGCACCGACCGTTCCA-GGGTTGGTCAAACCAACCTGGGC 823511 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 ||| || || || ||||| || || |||||||| |||||| Sbjct 823512 ATTGAGGTTGGCGCCATCAAGGTAGACCTGACCTCCATTG 823551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578998161163160