Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq8 123 7e-23 >seq8 Length=1060936 Score = 123 bits (136), Expect = 7e-23 Identities = 190/266 (71%), Gaps = 10/266 (4%) Strand=Plus/Plus Query 302583 CTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAG 302642 ||||| || || | ||||||||| || || || || || ||||| |||||||| | Sbjct 423743 CTTGACCAACCGTCTCTGAATATACCCCGTCTCAGCCGTCTTGACAGCGGTATCAATCAA 423802 Query 302643 ACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT--AGCCCCCCAATA 302700 ||| | | ||||||||| || |||||||| | ||||| |||| || |||||| || | Sbjct 423803 ACCCTCTCTACCACCCATCGCGTGGAAGAAGAACTCTTGCGGT-GTCAAGCCCCGCAG-A 423860 Query 302701 AAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGC 302760 | ||| | || ||||||||||||| ||| || || |||| ||| | ||||| ||| Sbjct 423861 TACGAGTTTTCGACGAAACCACGCGACTCTGGTCCATAGTCGTCTTTGCTGAAGTGCGGC 423920 Query 302761 AGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCA-- 302818 ||||| | | || |||| | ||||||||||| || ||||| | ||||| || | Sbjct 423921 AGGGTACGATGCTTGAAGCCAAAGGGGATACGCTTGCCTTCAACAATTTGCTGGCCGACA 423980 Query 302819 -GGCACGAAATCATCTGCGAAATATT 302843 || ||| |||||| ||||| || Sbjct 423981 CAGCCCGA---CATCTGGGAAATGTT 424003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816977697121