Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq5 113 4e-20 >seq5 Length=1214282 Score = 113 bits (124), Expect = 4e-20 Identities = 147/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||| || | ||| || |||| || |||||||| || || || Sbjct 997636 CTCCTTTTGGATGTTGTAATCCGCAAGGGTGCGACCGTCTTCAAGCTGCTTGCCGGCGAA 997695 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | | ||||||||| |||||| ||| | || Sbjct 997696 GATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCTTGGATCTTGGCCTTGA-CGT 997754 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| || || ||||||| ||||| || |||||||| | || || | Sbjct 997755 TGTCGATCGTGTCCGAAGACTCGACCTCCAAGGTGATGGTCTTACCCGTGAGGGTCTTGA 997814 Query 35724 CAAATATCTGCATTCTGTGCG 35744 | || |||||||| || ||| Sbjct 997815 CGAAAATCTGCATGTTGGGCG 997835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450793414047640