Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 6e-12 >seq7 Length=1099351 Score = 87.8 bits (96), Expect = 6e-12 Identities = 119/165 (72%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 443705 CGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCT 443764 |||||| || | |||||||| | ||||| || | || || ||| |||| || | Sbjct 134549 CGAGCGCCTGATTGCTTTTGCCGCCGTCGAGGGCATCTTCTTCTCTGGCTCCTTT-GCTT 134491 Query 443765 CCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGA 443824 ||||||||||| | || |||||||| || |||| ||| || |||||| ||||| || | Sbjct 134490 CCATCTTCTGGCTCAAGAAGCGTGGGCTCATGCCCGGGCTCACCTTTTCCAACGAGCTCA 134431 Query 443825 TCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 || || ||||| ||| | || |||||| ||||| || |||| Sbjct 134430 TCTCCCGTGACGAAGGTCTCCACACCGACTTTGCCTGCCTCCTCT 134386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335328431685