Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Holtermanniella_20nyarrowii_20[genbank_20GCA_5F001600035.1_202016- 03-01] 33 sequences; 17,735,411 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq5 118 2e-21 >seq5 Length=1214282 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || ||||| || ||||| ||||||||||||||||| || | || | || ||| Sbjct 997616 AGCACGAGGTGAAGGGTCGACTCCTTTTGGATGTTGTAATCCGCAAGGGTGCGACCGTCT 997675 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||||||||| | | ||| || ||||| ||| Sbjct 997676 TCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCT 997735 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | |||| ||| ||| || || | || || || Sbjct 997736 TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCCAAGGTGATGGTC 997795 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || |||||||| ||||| ||||| | |||||| || Sbjct 997796 TTACCCGTGAGGGTCTTGACGAAAATCTGCATGTT 997830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820312150143