Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq286 100 6e-16 >seq286 Length=987428 Score = 100 bits (110), Expect = 6e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || ||||||||||| ||||| | ||| | || ||||| ||||| || |||||||| | Sbjct 831897 CTCATTGGCATGAATGCTGACTTGATGTGTCAATACATTGAATTTGTTGCCGACCGTCTC 831838 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | ||||| || || | || || |||| ||||| | ||||| || | || ||||| Sbjct 831837 CTCGTTGCCCTCGGAAATGACAAGTTGTATAACTCGACAAACCCATTCGACTTCATGGAC 831778 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTA 230618 | || || || || || ||||| ||||||||||| ||||| ||| ||||| Sbjct 831777 ATGATCTCACTGCAGGGCAAGACAAACTTCTTCGAGAAGCGCGTCTCAGACTA 831725 Score = 86.0 bits (94), Expect = 1e-11 Identities = 126/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 230445 CCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 ||| || || ||||| || ||| ||| | ||||||||||||||||| |||||| | || Sbjct 834450 CCTGATCGGTATGAATGCGACACTCATGTGCCAGTACATCGAATTCGTCGCCGACAG-AT 834508 Query 230505 TTTTGTTG-CACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGG 230563 | || | | || || ||| ||| || |||| || || |||| ||||||| Sbjct 834509 TGCTGATATCTCTGGGGAACGGAAAATATTATGGCTCTTCCAATCCATTTGACTTTATGG 834568 Query 230564 AGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTAT 230619 | | |||||| | |||||||||||||| || ||||| ||| | ||| |||||| Sbjct 834569 ACATGATTTCGTTGCAAGGGAAGACCAATTTTTTCGAGAAGAGGGTCTCGGACTAT 834624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819391854200