Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq286 161 1e-34 seq335 107 2e-18 >seq286 Length=987428 Score = 161 bits (178), Expect = 1e-34 Identities = 305/449 (68%), Gaps = 0/449 (0%) Strand=Plus/Minus Query 16181 TTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATA 16240 || |||| | | |||| |||||| ||||| ||| || | || ||||||| || ||| Sbjct 834307 TTGAGGTATGTGAACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATA 834248 Query 16241 AGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCA 16300 || || |||||||| || | || ||||| || |||||||| | ||||||||| | Sbjct 834247 AGCTCATTGGAAAATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAG 834188 Query 16301 GCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360 ||||| ||||| ||||||||||| || || |||| ||||| || | || |||||||| Sbjct 834187 GCAAACGACCCAGAAAAGAATATCCCTTCCACAGCAGCAAAGGCAACTAGACGTTCCGCA 834128 Query 16361 TACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAA 16420 | || | || ||| | ||||||||| | |||| || ||||| | || || ||| Sbjct 834127 AAGGTTGAATGTTTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAA 834068 Query 16421 TCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTA 16480 || || |||||||| | || | | | ||||| ||| | || || | Sbjct 834067 GGAATGGTGTCTATGGCGTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCA 834008 Query 16481 TCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAG 16540 || || || || ||| |||| || || || ||||| || || ||||| |||||| Sbjct 834007 TCGATAAGCAACGAATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAG 833948 Query 16541 AAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTC 16600 ||| | || ||||| | || || ||||| | |||| | ||| | |||||||| || Sbjct 833947 AAGGAACGCGCCTCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTT 833888 Query 16601 ACGATACCGTCACTTGCAGCAAAAAACGC 16629 || || || || || ||||| || || Sbjct 833887 ACAATGCCATCTGAGGCCGCAAAGAAAGC 833859 Score = 127 bits (140), Expect = 2e-24 Identities = 289/432 (67%), Gaps = 2/432 (0%) Strand=Plus/Plus Query 16181 TTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATA 16240 || ||||| | || | || || || |||||| || | ||||||||| | ||| || Sbjct 832044 TTGAGGTGGCTGAAGAGAAGGCATGCAAAGTCGGTGTGCATTCCTTCGTCGCGGCTAATG 832103 Query 16241 AGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCA 16300 || || ||||||||||| | || ||||| ||||| ||||| | |||||| || | Sbjct 832104 AGCTCATTGGAAAAAGTCAGGCCAGGCATCAAGCCTCGCTTCTTCATCCAGAAGATGGAC 832163 Query 16301 GCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360 || || || ||||| ||||| || || ||||||| ||||| || | || ||||| | Sbjct 832164 GCGAAAGAGCCCGAGAAGAAGATGCCTTCAACAGCAGCAAACGCCACCAAGCGTTCACCA 832223 Query 16361 TACGTAGCATCTTTATTACGA-ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACA 16419 | || | | | | | || ||||| ||| || |||| || || || | || | ||| Sbjct 832224 AAAGTTG-ACCGTCGGTCGGAGATCCAGTTCAGTGCCCAGTCTGCCTTGCGCTTGACACA 832282 Query 16420 ATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGT 16479 || || || | ||| | || | | ||| ||| | || | ||||| || Sbjct 832283 CGGAATGGTCTCCACGGCGTCGAAAAGGTACTCGCGTTCGGCAGCGTCCTTGATATAGGT 832342 Query 16480 ATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATA 16539 || || || | ||| | |||||||| |||||||| || || || || ||||| Sbjct 832343 GTCGATGAGAAGCGAATACGTCTCTGAGTGAATGTTCTCCATCATGATTTGGAAGCCATA 832402 Query 16540 GAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATT 16599 ||| ||||||||||| || | ||| || || | |||| || || | |||||||| || Sbjct 832403 GAAACATCGAGCCTCGGCAACTTGGACCTCGTTGGAAAAGCGCTCGACAAGGTTCTCGTT 832462 Query 16600 CACGATACCGTC 16611 || ||||| || Sbjct 832463 GACAATACCATC 832474 >seq335 Length=51571 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252 |||| || ||| ||||||||| ||| || ||||| ||||||||||| |||||||| || Sbjct 20026 AACAATAAACAGGCGAAGTCGGTATGAAGCCCTTCATCTCTGCTGATTAGTTCGTTCGAG 19967 Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCC 16312 ||||| || |||||||| || |||||||| | ||| | | ||| ||||| || || Sbjct 19966 AAAGTCAAACCTGGCATAAGCCCCCGTTTCTTGATCCAATAGACCGCTGCAAACGATCCG 19907 Query 16313 GAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 || ||||| || || || ||| | || || || Sbjct 19906 GAGAAGAAAATGCCTTCGACACAAGCGAAGGC 19875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511412226488800