Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq113 131 1e-25 seq1 125 6e-24 seq69 98.7 9e-16 seq284 84.2 2e-11 >seq113 Length=2004859 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 |||||||| || |||||||| |||||| | ||||||| ||||||||||| || || Sbjct 833614 GTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGCTGCTTGCCC 833673 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | ||||||||| || || || || ||||||||||| || ||| ||| Sbjct 833674 GCGAAGATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTGCTTTG 833733 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | ||||||||||| ||| | || || || || || || Sbjct 833734 ACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCAGTGAGGGTC 833793 Query 118722 TTTACAAAAATCTGCAT 118738 || ||||| |||||||| Sbjct 833794 TTGACAAAGATCTGCAT 833810 Score = 107 bits (118), Expect = 2e-18 Identities = 151/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 118529 CACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCT 118587 ||||||| || | || ||||| || |||||||||||||| | |||||| ||| | Sbjct 833883 CACCAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTT 833942 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | ||||| ||||| ||| |||| | ||||| || || || || || ||||||||||| Sbjct 833943 CCAGCTGCTTTCCGGCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCT 834002 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 || || || || | || | ||| |||| | |||||| || | ||| | || | Sbjct 834003 GGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACTTCCAGGGTGATGGTCT 834062 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || ||||| ||||| || ||||||||||| Sbjct 834063 TTCCCGTCAGTGTTTTGACGAAAATCTGCAT 834093 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606 ||| || ||||||||||| || | ||||||| ||||||||||| || ||||| | Sbjct 833336 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGAGCTGCTTCCCAGCAAA 833395 Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666 || | ||||| || || || || || ||||||||||| ||| || || || | Sbjct 833396 AATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACATT 833455 Query 118667 TTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTA 118725 |||| ||||||| || | |||||||||| ||| | || || || || || || || | Sbjct 833456 GTCGATAGTGTCCGATGAT-TCGACCTCGAGGGTAATGGTCTTTCCCGTGAGCGTCTTGA 833514 Query 118726 CAAAAATCTGCAT 118738 | ||||| ||||| Sbjct 833515 CGAAAATTTGCAT 833527 >seq1 Length=2331425 Score = 125 bits (138), Expect = 6e-24 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || || ||||||||||| | ||| || |||||||| || Sbjct 482389 GTGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGGCCGTCCTCGAGTTG 482448 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| | || || ||||||||||||||||| ||||||||||| || ||| || Sbjct 482449 CTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCTGAATCTT 482508 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 | || || | |||| |||||| | |||||| || | || | ||| |||||||| Sbjct 482509 TGCCTTGACATTGTCGATGGTGTCGGAAGACTCGACTTCCAGCGTGATCGTCTTGCCGGT 482568 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || |||||||||||||| Sbjct 482569 CAATGTCTTCACAAAAATCTGCAT 482592 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || ||||| || || |||||||| || | ||||| |||||| Sbjct 482156 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGACCATCCTCA 482215 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || || | |||||||| || ||||| || || || || ||||||||| Sbjct 482216 AGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTTGTCTTGG 482275 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| || || | |||| || || | | ||||| |||| ||| | || ||| Sbjct 482276 ATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGATGGTCTTG 482335 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || ||||||||||| || || ||||||||| Sbjct 482336 CCTGTCAGAGTTTTGACGAAGATCTGCATG 482365 Score = 82.4 bits (90), Expect = 7e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 118531 CCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 ||||||| | || ||| || ||||| |||||||| || ||| ||| ||||| | Sbjct 481929 CCAAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCA 481988 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 || || || || ||||||| |||||||| || ||||| ||||||||||| || || Sbjct 481989 ATTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAA 482048 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | || | || |||| |||||| || | || | ||| || | Sbjct 482049 TCTTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTC 482108 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | |||| ||| || || || || ||||| Sbjct 482109 CCGTCAAAGTCTTCACGAAGATTTGCAT 482136 >seq69 Length=731732 Score = 98.7 bits (108), Expect = 9e-16 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||||| || ||||| ||||| |||||||| ||||| | ||||| |||||| Sbjct 268744 ACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCATCCTCC 268803 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 ||||| || || ||| |||| ||||||||||| |||||||| || Sbjct 268804 AGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGAT 268847 >seq284 Length=318945 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||| ||||| || || |||||||| ||||| | |||||| |||||| Sbjct 114510 ACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCGTCCTCG 114451 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTAT 118633 ||||| || ||||| |||| || ||||| || ||||| || || Sbjct 114450 AGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGCGGGAT 114407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433828602315280