Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq113 116 4e-21 seq1 109 6e-19 >seq113 Length=2004859 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| || ||||| | ||||| ||| |||| || |||||||| || ||||| Sbjct 833619 CTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAA 833678 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | ||||||||||| | || | | |||||||||| ||| ||| ||||| ||| Sbjct 833679 GATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTGCTTTGA-CGT 833737 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | |||||| ||| || || |||| || || || || || || || ||||| | Sbjct 833738 TGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCAGTGAGGGTCTTGA 833797 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 833798 CAAAGATCTGCAT 833810 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| ||||| ||||| || | ||||| ||| |||| || |||||||| ||| Sbjct 833331 GTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGAGCTGCTTCCCA 833390 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTT 43105 || || || | ||||| ||||| | || | | |||||||||| ||| | || | || Sbjct 833391 GCAAAAATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCC-TGAATCTTCGCCTT 833449 Query 43106 GAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 43165 || | | | ||||| ||||| || |||| || ||||| || ||||| ||||| Sbjct 833450 GACATTGTCGATAGTGTCCGATGATTCGACCTCGAGGGTAATGGTCTTTCCCGTGAGCGT 833509 Query 43166 CTTTACAAAGATTTGCAT 43183 ||| || || |||||||| Sbjct 833510 CTTGACGAAAATTTGCAT 833527 >seq1 Length=2331425 Score = 109 bits (120), Expect = 6e-19 Identities = 151/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 42976 CCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTA 43035 |||| || | ||||||||||| |||||||||||||| | || ||| ||| |||| || | Sbjct 481929 CCAAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCA 481988 Query 43036 GCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGA 43095 ||||| || || || ||||| ||||||||||| | || | || |||||| ||| ||| Sbjct 481989 ATTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC-TGA 482047 Query 43096 TTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 | || | || | | | | ||| || || || || || | |||||| || || Sbjct 482048 ATCTTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTT 482107 Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| | ||||| || ||||||||||| Sbjct 482108 CCCGTCAAAGTCTTCACGAAGATTTGCAT 482136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571815169775200