Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq286 158 1e-33 seq2 131 2e-25 >seq286 Length=987428 Score = 158 bits (174), Expect = 1e-33 Identities = 299/440 (68%), Gaps = 0/440 (0%) Strand=Plus/Minus Query 16226 AACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAA 16285 |||| || ||| || ||||| ||||| || ||||| | ||| || | ||| || ||| Sbjct 834295 AACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAA 834236 Query 16286 AATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCA 16345 ||||| || || ||||| || || ||||| || ||||| ||||| | |||||| || ||| Sbjct 834235 AATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCA 834176 Query 16346 GAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAttt 16405 ||||||||||| ||||| || || ||||| ||||| | || || | | ||| || | Sbjct 834175 GAAAAGAATATCCCTTCCACAGCAGCAAAGGCAACTAGACGTTCCGCAAAGGTTGAATGT 834116 Query 16406 ttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCT 16465 || | ||||||||| |||||||| ||||| | || | || ||| | ||| Sbjct 834115 TTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCT 834056 Query 16466 ATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAA 16525 || || | || | | || | ||| || || ||| || || || Sbjct 834055 ATGGCGTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAAGCAAC 833996 Query 16526 CTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCT 16585 |||| |||| ||||| ||||||||||| || ||||| ||||| ||| | | || Sbjct 833995 GAATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCGCC 833936 Query 16586 TCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCG 16645 |||| || || |||||| |||||||||| | | ||| ||||| || || ||||| Sbjct 833935 TCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCATCT 833876 Query 16646 CTAGCTGCAAAAAACGCAAG 16665 || ||||| || ||||| Sbjct 833875 GAGGCCGCAAAGAAAGCAAG 833856 >seq2 Length=2111947 Score = 131 bits (144), Expect = 2e-25 Identities = 244/353 (69%), Gaps = 4/353 (1%) Strand=Plus/Plus Query 16226 AACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAA 16285 |||| | |||||||||||| |||||| || ||||| ||||| || | ||| || ||| Sbjct 203927 AACAAAAGACAAGCAAAATCCGTATGCAAGCCCTCGTCTCTACTGATGAGCTCATTGGAA 203986 Query 16286 AATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCA 16345 ||||| | ||| ||||| | || ||||| || | ||||||||| || || || |||||| Sbjct 203987 AATGTTAAACCGGGCATCAAGCCACGTTTCTTCAACCAAAATATGGCCGCGAAAGAACCA 204046 Query 16346 GAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCG-CTCACCGTACGTTCTAtt 16404 ||||| ||||| ||||| || |||||| || || | || ||| ||| ||| | Sbjct 204047 GAAAAAAATATGCCTTCGACACAGGCAAACGCCACGAGGCGACTC-CCGAACGAAACGGT 204105 Query 16405 tttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCA-TGTTCT 16463 | ||| | |||| ||||||| || |||| ||||| |||| || |||| | Sbjct 204106 GGAATCTTCGACCCATCGCAATGCCCAATCCGCCTTTTTTTTAATGCAGTCCACTGTT-T 204164 Query 16464 CTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTA 16523 | | || ||||| | || || |||| | | ||| || || || || || || | Sbjct 204165 CAAGCGCGTTAAAGAGATGGGCTTGTTCTCGGGTGTCTTTAACGTAGGTGTCGATGAGCA 204224 Query 16524 AACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAG 16576 || ||| |||||||||||| || || || ||||| ||||| || ||| Sbjct 204225 AAGAATATGTTTCTGAATGAACGTTTTCGATCATGATCTGGAAACCGTAGAAG 204277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462510034324000