Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq286 149 6e-31 seq2 129 6e-25 >seq286 Length=987428 Score = 149 bits (164), Expect = 6e-31 Identities = 377/567 (66%), Gaps = 15/567 (3%) Strand=Plus/Minus Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259 || ||| || ||||| || | |||||| |||| ||||||||| || || |||||||| Sbjct 834290 TAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAAAATGT 834231 Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 14319 | || ||||| | || ||||| || | ||| ||||||| || || || || ||||| Sbjct 834230 CAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCAGAAAA 834171 Query 14320 GAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTT 14379 |||||| || || || |||||||| || | || ||||| |||| | || | ||||| Sbjct 834170 GAATATCCCTTCCACAGCAGCAAAGGCAACTAGACGTTCCGCAAAGGTTGAATGTTTGTC 834111 Query 14380 CGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGC 14439 || ||||||||| |||||| |||| ||| || || || || || || || || Sbjct 834110 TGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCTATGGC 834051 Query 14440 ATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTA 14497 | || | || || ||| | | | |||| ||||| ||| ||||| || | Sbjct 834050 GTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTG--ATGTAGCCATCGATAAGCAACGAA 833993 Query 14498 TACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14557 ||| |||| || || || || ||||| || ||||| ||||| || | | || || Sbjct 833992 TACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCGCCTCG 833933 Query 14558 G--ACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCAC 14615 | ||| || || || |||| |||||| | | || || || || || ||||| Sbjct 833932 GGTACC--TGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCATCTG 833875 Query 14616 TAGCTGCAAAAAATGC--CAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTT 14673 || ||||| || || || ||| | ||||| || |||| |||| | |||| || Sbjct 833874 AGGCCGCAAAGAAAGCAAGAACATGCGAT--ATAAAATACCGCTCATCATGGTTGAGATT 833817 Query 14674 ---TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14730 ||||| || | || || | ||||| || | ||| ||| ||||||| || || Sbjct 833816 GAAGTTCCAGTCCACGAAGTCATGGGAAAGGTCAAGTTCTTCAGCTGTCCAGAATGAGGC 833757 Query 14731 AACAGCTTTTTTATACATTACCCATAT 14757 |||||| || || | | |||||| Sbjct 833756 TTGAGCTTTCTTGTAGAATTGCCATAT 833730 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 14237 CTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAAT 14296 ||||| || || || ||||| || | || |||||||| ||||| || || | ||| || Sbjct 832098 CTAATGAGCTCATTGGAAAAAGTCAGGCCAGGCATCAAGCCTCGCTTCTTCATCCAGAAG 832157 Query 14297 ATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGT 14356 || | ||||| || || || ||||| || || ||||| ||||||||||| | || ||| Sbjct 832158 ATGGACGCGAAAGAGCCCGAGAAGAAGATGCCTTCAACAGCAGCAAACGCCACCAAGCGT 832217 Query 14357 TCTCCAAA 14364 || ||||| Sbjct 832218 TCACCAAA 832225 >seq2 Length=2111947 Score = 129 bits (142), Expect = 6e-25 Identities = 236/344 (69%), Gaps = 4/344 (1%) Strand=Plus/Plus Query 14203 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 14262 ||| |||||||| ||| | |||||| |||||||| || || || || ||||||||||| Sbjct 203935 ACAAGCAAAATCCGTATGCAAGCCCTCGTCTCTACTGATGAGCTCATTGGAAAATGTTAA 203994 Query 14263 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 14322 || |||||||| || ||||| || ||||||||||| || ||||| || || ||||| || Sbjct 203995 ACCGGGCATCAAGCCACGTTTCTTCAACCAAAATATGGCCGCGAAAGAACCAGAAAAAAA 204054 Query 14323 TATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACG--ATGCTTTTTTGTTC 14380 ||| || || || |||||||| | | || || |||| | | | | ||| Sbjct 204055 TATGCCTTCGACACAGGCAAACGCCACGAGGCGACTCCCGAACGAAACGGTGGAATCTTC 204114 Query 14381 GATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCA 14440 | | |||| ||||| || | ||||||||||| | |||| |||||||| || Sbjct 204115 G--ACCCATCGCAATGCCCAATCCGCCTTTTTTTTAATGCAGTCCACTGTTTCAAGCGCG 204172 Query 14441 TTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 14500 ||||| | ||| | | ||| || | || ||| || || || || || ||| Sbjct 204173 TTAAAGAGATGGGCTTGTTCTCGGGTGTCTTTAACGTAGGTGTCGATGAGCAAAGAATAT 204232 Query 14501 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAA 14544 |||| || || | |||||| || ||||| ||||| || || Sbjct 204233 GTTTCTGAATGAACGTTTTCGATCATGATCTGGAAACCGTAGAA 204276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482343550031200