Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq286 170 2e-37 seq113 109 5e-19 seq1 109 5e-19 seq308 96.9 3e-15 seq335 95.1 1e-14 >seq286 Length=987428 Score = 170 bits (188), Expect = 2e-37 Identities = 381/565 (67%), Gaps = 13/565 (2%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || || ||||||||||| | || ||| | ||||| Sbjct 832621 ATCTGGCAAATGTACAAGAAGGCTGAGGCGTCGTTTTGGACTGCAGAGGAAATGGACCTC 832562 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCCTC---AAAGAATCTGAGAGAAATTTTATTAAA 57686 || || ||| | || ||| ||| | || || ||| | |||| || Sbjct 832561 TCGAAAGATATTCATGACTGGACAACCCGCCTTAACGACAACGAGCGCCATTTCATCTCC 832502 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 || || | || || ||||| || || ||||||||||| |||||||| | ||||| | Sbjct 832501 CATGTCCTCGCTTTCTTCGCAGCCTCGGATGGTATTGTCAACGAGAACCTTGTCGAGCGC 832442 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 ||||| | || || ||||| | ||||| |||| || || || || ||| | || Sbjct 832441 TTTTCCAACGAGGTCCAAGTTGCCGAGGCTCGATGTTTCTATGGCTTCCAAATCATGATG 832382 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGAC 57866 || ||| | || ||||| | ||||||||| |||||||| || || | |||||| | | Sbjct 832381 GAGAACATTCACTCAGAGACGTATTCGCTTCTCATCGACACCTATATCAAGGACGCTGCC 832322 Query 57867 GAGAAACGTAGAC-TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGC 57922 || | || || | ||| |||| | || || || || | | |||| ||||| Sbjct 832321 GA-ACGCGAGTACCTTTTCGACGCCGTGGAGACCATTCC---GTGTGTCAAGCGCAAGGC 832266 Query 57923 AGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCA-CGTTCGCCGAGAGGCTAATCG 57981 ||| ||| || | || ||||| | | |||| || | || | || | | | | Sbjct 832265 AGACTGGGCACTGAACTGGATCTCCGAC-CGACGGTCAACTTTTGGTGAACGCTTGGTGG 832207 Query 57982 CGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGA 58041 |||| || || || ||||| || ||||| |||||| || ||| | || || ||||||| Sbjct 832206 CGTTTGCTGCTGTTGAAGGCATCTTCTTCTCGGGCTCTTTCGCGTCCATCTTCTGGATGA 832147 Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 |||| || ||| ||||||| |||||||| ||| ||| ||| | || |||||||| | Sbjct 832146 AGAAGCGAGGCTTGATGCCTGGCCTGACTTTTTCCAATGAGCTCATTAGCCGCGACGAAG 832087 Query 58102 GTCTCCATACTGATTTTGCGTGCCT 58126 | | || || || ||||| ||||| Sbjct 832086 GAATGCACACCGACTTTGCATGCCT 832062 Score = 136 bits (150), Expect = 4e-27 Identities = 365/556 (66%), Gaps = 9/556 (2%) Strand=Plus/Plus Query 57582 TACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTG 57641 ||||| || || |||| || || ||||| | |||||| | ||||| || | || | Sbjct 833742 TACAAGAAAGCTCAAGCCTCATTCTGGACAGCTGAAGAACTTGACCTTTCCCATGACTTC 833801 Query 57642 AGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCG 57698 || ||| | | | ||||| | |||| | ||||||| || || | || Sbjct 833802 GTGGACTGGAACTTCAATCTCAACCATGATGAGCGGTATTTTATATCGCATGTTCTTGCT 833861 Query 57699 TTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAA 57758 || || || || || ||||| ||||| |||||||| | |||||||| |||| ||| Sbjct 833862 TTCTTTGCGGCCTCAGATGGCATTGTAAACGAGAACCTCGTCGAAAGGTTTTGTGGTGAA 833921 Query 57759 GTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCAT 57818 ||||| || | |||||| | | ||| || || |||||| | || || || | ||| Sbjct 833922 GTGCAGGTACCCGAGGCGCGTTCCTTCTATGGCTTTCAAATCATGATGGAGAATATCCAT 833981 Query 57819 TCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGA 57878 || |||| ||||||| | || |||||| ||| | ||||| | ||| Sbjct 833982 TCCGAAACGTATTCGTTGCTTATCGATGGCTACATCAAGGATCCGCAGGAGCGGGCCCAC 834041 Query 57879 CTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAG---AAGGCAGAGTGGTCAATC 57935 || ||| |||| || || || || || ||| ||| || || || ||| | | Sbjct 834042 CTTTTCGACGCCATAGACACCATTCCTTGCATC---AAGCGCAAAGCTGATTGGGCTCTA 834098 Query 57936 AAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTC 57995 |||||||| | | | || || || || | ||| | || || || || || Sbjct 834099 AAATGGATTTCAGACAAACATTCAACCTTTGCGGAACGTCTAGTTGCCTTTGCTGCTGTG 834158 Query 57996 GAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTG 58055 ||||| ||||||||||| || ||||| ||||||| ||||| |||||||| || || Sbjct 834159 GAAGGGATATTCTTTTCTGGGTCGTTTGCCTCAATATTCTGGATCAAGAAACGTGGTCTT 834218 Query 58056 ATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGAT 58115 ||||| |||||||| ||| ||| ||| | || || |||||||| | || || ||| Sbjct 834219 ATGCCTGGCCTGACATTTTCCAATGAGCTTATTAGTCGAGACGAGGGCTTGCACACCGAT 834278 Query 58116 TTTGCGTGCCTAATGT 58131 || || || ||| ||| Sbjct 834279 TTCGCATGTCTATTGT 834294 >seq113 Length=2004859 Score = 109 bits (120), Expect = 5e-19 Identities = 150/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| || || || || || || ||| |||| || || ||||| Sbjct 833810 ATGCAGATCTTTGTCAAGACCCTCACTGGGAAGACTATTACCCTCGAGGTCGAGTCGTCC 833751 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | |||||| || ||| | ||||||||| || | || || ||||| Sbjct 833750 GACACCATCGACAACGTCAAAGCAAAGA-TCCAGGACAAGGAGGGTATTCCCCCTGACCA 833692 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||| | || ||||| ||||| ||| | || ||| ||| | ||||||||| Sbjct 833691 GCAGCGTTTGATCTTCGCGGGCAAGCAGCTCGAGGACGGGCGCACTCTTTCCGATTATAA 833632 Query 31372 CATTCAAAAAGAATCGACTCTTCATCT 31398 |||||| || || || ||||| ||||| Sbjct 833631 CATTCAGAAGGAGTCTACTCTGCATCT 833605 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| ||||| || || || || || || ||| |||| || ||| | || Sbjct 833527 ATGCAAATTTTCGTCAAGACGCTCACGGGAAAGACCATTACCCTCGAGGTCGAATCATCG 833468 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | |||| | ||||| || || ||||||||| || | || || ||||| Sbjct 833467 GACACTATCGACAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAA 833408 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || || ||||| || ||| | || ||| ||| | || || ||| Sbjct 833407 CAGCGCTTGATTTTTGCTGGGAAGCAGCTCGAGGACGGGCGCACTCTTTCGGACTACAAC 833348 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGG 31400 ||||| || || |||||||| |||| Sbjct 833347 ATTCAGAAGGAGAGCACTCTTCACCTGG 833320 >seq1 Length=2331425 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| || |||||||||||||| || |||||| |||| || ||| | || Sbjct 482365 CATGCAGATCTTCGTCAAAACTCTGACAGGCAAGACCATCACCCTCGAAGTCGAATCCTC 482306 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | | |||| | ||||| || ||| ||||||||||| | ||||| || || Sbjct 482305 CGATACTATCGACAACGTCAAGGCGAAAATCCAAGACAAGGAAGGGATTCCGCCTGATCA 482246 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || ||||| || || || ||||| ||| | || || | || | || || || Sbjct 482245 ACAACGTCTCATTTTTGCCGGCAAGCAGCTTGAGGATGGTCGCACCCTATCGGACTACAA 482186 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || ||||| || || ||||| || | ||| | || |||| Sbjct 482185 CATCCAGAAGGAGTCGACGCTCCACCTGGTTCTCCGCCTGCGCGGTGGTA 482136 >seq308 Length=957167 Score = 96.9 bits (106), Expect = 3e-15 Identities = 252/378 (67%), Gaps = 15/378 (4%) Strand=Plus/Plus Query 22504 TGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCAT 22563 |||| | ||||||||| | |||||| ||||| |||||| || || ||||| ||||| Sbjct 618012 TGTGTAAGGTTCGAAACACTCATTGAAGCCCAGGATCTGACTTGTGGATGCGGTGGGCAT 618071 Query 22564 CGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTC--TTGAGCATC 22621 || || || ||||| || || | ||| | || ||||| ||| || | || Sbjct 618072 AGGAGCTGTAAGCAGCGAATTCCTAAGGCCAGTCCGTGCGATTTT-CTCCTTTAATGAT- 618129 Query 22622 GACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCG 22681 | ||| ||||||| ||| ||| || ||| |||||| ||| | || | | || Sbjct 618130 GCCCAATCCCACAAGCCGGTCGGAGTTACAC---CCCACAAATCAAACTGGAGCTGTCCC 618186 Query 22682 CGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAG 22741 | ||||| ||||| | | ||||| || ||||||| || | || | || | Sbjct 618187 TGCTGAGCCGGACTGCCAACCCAGGTTTCATATGGACCATCCTTCTCAGCTATCTCAGCG 618246 Query 22742 CTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTC---GGCG 22798 ||||| |||| || |||| ||| || ||||||||||||| |||| | || ||| Sbjct 618247 CTCGCTTCCAGTGCACCGTGATAGATCGTCTCGAAGATTTGAATGTTGAGCTCCTTGGCT 618306 Query 22799 GC-GGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAAC 22857 || || || || | |||||| ||| || ||| ||||| |||| |||||| || Sbjct 618307 GCTGGAGA----GTCAAATGGCATATGCAGAGCCATGAAGGCGTCGGCCAGACCCTGCAC 618362 Query 22858 GCCTATACCGATCGGTCG 22875 || || ||||| ||||| Sbjct 618363 ACCGATTCCGATGGGTCG 618380 Score = 84.2 bits (92), Expect = 2e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 ||||| || || ||||| || |||||||| || || | || | | || || ||||| Sbjct 618962 AAAAGGTCAGGGATCCACAGCGCGTAGAAGAGATCTCTTGCCCTAGCTTCTTCCTTGCCA 619021 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 ||||| ||||| | || || ||||| || |||||||| || |||| ||| | Sbjct 619022 TGATTCTTCCGTAAATCGAGGAAATCAAACACATCAGCATGCCAGGGTTCGATGTAGATC 619081 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTG 23527 || || || || |||| ||| || || || ||||||||||| || || ||| Sbjct 619082 GCGAATGCTCCTGGTCGCTTGTTTCCTCCTTGATCGACGTAGCGAGCGGTG 619132 >seq335 Length=51571 Score = 95.1 bits (104), Expect = 1e-14 Identities = 376/584 (64%), Gaps = 27/584 (5%) Strand=Plus/Plus Query 57573 TGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCT 57632 ||| | ||||| || || || || | |||||||||||||| || ||| | || || | Sbjct 19464 TGGCAGATGTATAAGAAAGCGGAGTCGTCGTTTTGGACCGTTGACGAACTTGATCTTCGT 19523 Query 57633 AAGGATCTGAGCGATTGGGA-----TTCCCTCAAAGAATCTGAGAGAAATTTTATTAAAC 57687 ||| || |||||||| || ||||| | ||| || ||||| | || Sbjct 19524 TCCGATTTGGCGGATTGGGACCAACGTCTATCAAACGA--TGACAGGCATTTTTTGTCAC 19581 Query 57688 ACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGAT 57747 ||||| |||| || || || || ||||| || || || ||||| ||| | | ||| | | Sbjct 19582 ACGTGCTGGCATTCTTTGCTGCCTCCGACGGCATCGTCAACGAAAATCTTTTGGAACGGT 19641 Query 57748 TTTCACAAGA----AGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCA---AGTG 57800 |||| | ||| || || | |||||| | | |||||||| ||||| | || Sbjct 19642 TTTCTCGAGAGATCGGTCCATG----GGAGGCCCGTTCTTTTTACGGTTTTCAGACAATG 19697 Query 57801 GCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGAC 57860 || || || || || || ||| ||||| | | || ||||| || | |||| Sbjct 19698 ---ATCGAGAATGTTCACTCCGAAGCATATTCCTTGTTGATAGATACCTATATTCGGGAC 19754 Query 57861 AACGACG-AGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAA 57919 | || || | || || ||||||||||| ||||| || || || || | ||| Sbjct 19755 AGCGCCGAACGGACCTA-TCTGTTCAACGCCATCGAGACCATTCCTTGTATTCGGAGGAA 19813 Query 57920 GGCAGAGTGGTCAATCAAATGGATAAA--AAGCGCCACGGCCACGTTCGCCGAGAGGCTA 57977 |||| || || | |||||||| || | || | || || || ||||| | | Sbjct 19814 AGCAGGCTGTGCATTAAAATGGATTAACGATCCGACCCG--CATTTTTCCCGAGCGCTTG 19871 Query 57978 ATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGG 58037 | || ||||| |||||||| || ||||| || || ||||| || | | |||| Sbjct 19872 GTGGCCTTCGCTTGTGTCGAAGGCATTTTCTTCTCCGGATCGTTTGCAGCGGTCTATTGG 19931 Query 58038 ATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGAC 58097 || |||||||| || || ||||| || |||| || ||||| | || | || Sbjct 19932 ATCAAGAAACGGGGGCTTATGCCAGGTTTGACTTTCTCGAACGAACTAATCAGCAGAGAT 19991 Query 58098 GAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT 58141 || || || ||||| || || || || || ||| ||| |||| Sbjct 19992 GAAGGGCTTCATACCGACTTCGCCTGTTTATTGTTCTCCTACAT 20035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445764505492800