Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq286 150 2e-31 seq2 114 2e-20 seq308 98.7 1e-15 >seq286 Length=987428 Score = 150 bits (166), Expect = 2e-31 Identities = 311/460 (68%), Gaps = 7/460 (2%) Strand=Plus/Minus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| | ||||||||||||| ||| | |||||||||| |||||| | || |||||| Sbjct 834295 AACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAA 834236 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || || || || ||||| || ||||| || || | ||| ||||| || ||||| || ||| Sbjct 834235 AATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCA 834176 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA--- 36325 |||||||| || ||||| || || |||||||||| || | || || | | | Sbjct 834175 GAAAAGAATATCCCTTCCACAGCAGCAAAGGCAACTAGACGTTCCGCAAAGGTTGAATGT 834116 Query 36326 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 36385 |||| ||||| ||| |||||||||| || || || | ||||| || || ||| Sbjct 834115 TTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCT 834056 Query 36386 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA--AAA 36443 || || | || || | | || | ||| || | || ||| || | || Sbjct 834055 ATGGCGTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAAGCAAC 833996 Query 36444 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 36503 || |||| |||| ||||| || || || || |||||||| || ||||| | | | Sbjct 833995 GA--ATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCG 833938 Query 36504 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 36563 |||||| | ||| ||||| |||||| | ||| | | || || || || || || | Sbjct 833937 CCTCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCAT 833878 Query 36564 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATA 36603 | ||| ||||| || || | ||||| ||||||||| Sbjct 833877 CTGAGGCCGCAAAGAAAGCAAGAACATGCGATATAAAATA 833838 >seq2 Length=2111947 Score = 114 bits (126), Expect = 2e-20 Identities = 221/322 (69%), Gaps = 7/322 (2%) Strand=Plus/Plus Query 36179 CCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 36238 |||||||||||||| || | || |||||||| || | |||||||| | |||||| || Sbjct 203957 CCCTCGTCTCTACTGATGAGCTCATTGGAAAATGTTAAACCGGGCATCAAGCCACGTTTC 204016 Query 36239 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 36298 || | ||||||||||| ||| || || |||||||| || || ||||| || ||||| Sbjct 204017 TTCAACCAAAATATGGCCGCGAAAGAACCAGAAAAAAATATGCCTTCGACACAGGCAAAC 204076 Query 36299 GCAATAAGTC-TCTCTCCA--TAACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCG 36355 || | || | ||| | | || ||| || | | ||| |||||||| Sbjct 204077 GCCACGAGGCGACTCCCGAACGAAACGGTGGAATCTTCGACCCATCGCAATGCCCAATCC 204136 Query 36356 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 36415 ||||| ||||| | || || ||| || | || |||||||||| | || ||| Sbjct 204137 GCCTTTTTTTTAATGCAGTCCACTGTTTCAAGCGCGTTAAAGAGATGGGCTTGTTCTCGG 204196 Query 36416 CTATCTTTAACATATGTATCAATCA--AAAGACTATACATTTCCGAATGAATGTTTTCAA 36473 | |||||||| || || || || | ||||| ||| |||| ||||||| |||||| | Sbjct 204197 GTGTCTTTAACGTAGGTGTCGATGAGCAAAGA--ATATGTTTCTGAATGAACGTTTTCGA 204254 Query 36474 TGGCCATTTGAAATCCGTAGAA 36495 | || || || |||||||| Sbjct 204255 TCATGATCTGGAAACCGTAGAA 204276 >seq308 Length=957167 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131 || || ||||| ||||| || || || | |||||| | ||| ||| || || || Sbjct 618962 AAAAGGTCAGGGATCCACAGCGCGTAGAAGAGATCTCTTGCCCTAGCTTCTTCCTTGCCA 619021 Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191 |||||| | ||||||||| | | | |||| |||||| ||||| | ||| || Sbjct 619022 TGATTCTTCCGTAAATCGAGGAAATCAAACACATCAGCATGCCAGGGTTCGATGTAGATC 619081 Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251 || | |||| || || ||||||||||| ||||| | ||| | ||||||| || |||| Sbjct 619082 GCGAATGCTCCTGGTCGCTTGTTTCCTCCTTGATCGACGTAGCGAGCGGTGGCATCATAA 619141 Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCC 66295 | | | |||||| | || ||||| || |||||||||||| Sbjct 619142 GCACGAAGCATTGGCACTATGCCATTTGAATAACCATTGGTCCC 619185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658170002765600