Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq91 86.0 5e-12 >seq91 Length=654354 Score = 86.0 bits (94), Expect = 5e-12 Identities = 129/178 (72%), Gaps = 4/178 (2%) Strand=Plus/Plus Query 20924 CAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTG-CACAAAGTCTC 20982 ||| | ||| ||||||| | |||||||||||||| ||| || || ||||| || Sbjct 174541 CAGTGCATCGACGTGGTCCCTATAAACGTGGGCGTC-CCCGAGCTGAATCACAAGTTCGT 174599 Query 20983 CCGGGGTCAG-GCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATG 21041 || |||| ||| || ||||| || |||| | ||| ||||| || ||| |||||| Sbjct 174600 GCGCC-TCAGTGCCAGTTACGTGCGCAATCATGTGCGTGAGGAGCGCATAGGATGCGATG 174658 Query 21042 TTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCT 21099 || || |||| ||||| || | ||| || || | ||| |||| | |||||||||||| Sbjct 174659 TTGAAAGGGATGCCGAGCCCAAGGTCTGCTGAGCGCTGATACATCAGGCAGGACAGCT 174716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774227403200