Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq286 100 2e-16 seq2 87.8 1e-12 >seq286 Length=987428 Score = 100 bits (110), Expect = 2e-16 Identities = 109/145 (75%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||| ||||| |||||||||||| || | || || || || || ||| |||| |||||| Sbjct 832209 TGGCGTTTGCTGCTGTTGAAGGCATCTTCTTCTCGGGCTCTTTCGCGTCCATCTTCTGGA 832150 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||| || | ||||| || || | |||||||| ||| | |||||||| |||| Sbjct 832149 TGAAGAAGCGAGGCTTGATGCCTGGCCTGACTTTTTCCAATGAGCTCATTAGCCGCGACG 832090 Query 22868 AAGGTCTACACTGTGACTTTGCTTG 22892 |||| | ||| |||||||| || Sbjct 832089 AAGGAATGCACACCGACTTTGCATG 832065 Score = 98.7 bits (108), Expect = 7e-16 Identities = 101/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 |||||| | |||||||| ||||| ||||| | | ||||||||||| ||||| | || Sbjct 834134 ACGTCTAGTTGCCTTTGCTGCTGTGGAAGGGATATTCTTTTCTGGGTCGTTTGCCTCAAT 834193 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 ||||||| | ||||||||| || ||||| || || | |||||||| ||| | ||||| Sbjct 834194 ATTCTGGATCAAGAAACGTGGTCTTATGCCTGGCCTGACATTTTCCAATGAGCTTATTAG 834253 Query 22860 CCGTGACGAAGG 22871 || ||||| || Sbjct 834254 TCGAGACGAGGG 834265 >seq2 Length=2111947 Score = 87.8 bits (96), Expect = 1e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 || ||| |||| ||||| ||| |||||| | | |||||||| || || ||||||||| Sbjct 204087 CGCCTCGTGGCGTTTGCCTGTGTCGAAGGCATATTTTTTTCTGGTTCTTTCGCGGCCATA 204028 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 || ||| ||||||||||| | ||||| || || | |||||||| ||| | || || Sbjct 204027 TTTTGGTTGAAGAAACGTGGCTTGATGCCCGGTTTAACATTTTCCAATGAGCTCATCAGT 203968 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGtt 22901 | ||||| || | || || ||||||||| | |||| Sbjct 203967 AGAGACGAGGGCTTGCATACGGATTTTGCTTGTCTTTTGTT 203927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356232123857020