Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq286 167 2e-36 seq2 122 8e-23 >seq286 Length=987428 Score = 167 bits (184), Expect = 2e-36 Identities = 381/567 (67%), Gaps = 15/567 (3%) Strand=Plus/Minus Query 13656 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13715 || ||| || ||||| || | |||||| |||| ||||||||| || || |||||||| Sbjct 834290 TAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAAAATGT 834231 Query 13716 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAA 13775 | || ||||| | || ||||| || | ||| ||||||| || || || || ||||| Sbjct 834230 CAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCAGAAAA 834171 Query 13776 GAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTT 13835 |||||| || || || |||||||| || | ||| ||||| |||| | || | ||||| Sbjct 834170 GAATATCCCTTCCACAGCAGCAAAGGCAACTAGACGTTCCGCAAAGGTTGAATGTTTGTC 834111 Query 13836 TGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGC 13895 ||| ||||||||| |||||| |||| ||| || || || || || || || || Sbjct 834110 TGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCTATGGC 834051 Query 13896 ATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTA 13953 | ||| | || || ||| | | | |||| ||||| ||| ||||| || | Sbjct 834050 GTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTG--ATGTAGCCATCGATAAGCAACGAA 833993 Query 13954 TACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCT 14013 ||| |||| || || || || || || || ||||| ||||| || | | || || Sbjct 833992 TACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCGCCTCG 833933 Query 14014 G--ACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071 | ||| || || || |||| ||||| | | ||| || || ||||| ||||| Sbjct 833932 GGTACC--TGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCATCTG 833875 Query 14072 TAGCTGCAAAAAATGC--CAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTT 14129 || ||||| || || || ||| | ||||| || |||| |||| |||||| || Sbjct 833874 AGGCCGCAAAGAAAGCAAGAACATGCGAT--ATAAAATACCGCTCATCATGGTTGAGATT 833817 Query 14130 ---TTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGC 14186 ||||| || | || || | ||||| || | ||| ||| ||||||| || || Sbjct 833816 GAAGTTCCAGTCCACGAAGTCATGGGAAAGGTCAAGTTCTTCAGCTGTCCAGAATGAGGC 833757 Query 14187 GACAGCTTTTTTATACATTACCCATAT 14213 |||||| || || | | |||||| Sbjct 833756 TTGAGCTTTCTTGTAGAATTGCCATAT 833730 Score = 82.4 bits (90), Expect = 7e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 13693 CTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAAT 13752 ||||| || || || ||||| || | || |||||||| ||||| || || | ||| || Sbjct 832098 CTAATGAGCTCATTGGAAAAAGTCAGGCCAGGCATCAAGCCTCGCTTCTTCATCCAGAAG 832157 Query 13753 ATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGT 13812 || | ||||| || || || ||||| || || ||||| ||||||||||| | | ||| Sbjct 832158 ATGGACGCGAAAGAGCCCGAGAAGAAGATGCCTTCAACAGCAGCAAACGCCACCAAGCGT 832217 Query 13813 TCTCCAAA 13820 || ||||| Sbjct 832218 TCACCAAA 832225 >seq2 Length=2111947 Score = 122 bits (134), Expect = 8e-23 Identities = 232/342 (68%), Gaps = 0/342 (0%) Strand=Plus/Plus Query 13659 ACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAA 13718 ||| |||||||| ||| | |||||| |||||||| || || || || ||||||||||| Sbjct 203935 ACAAGCAAAATCCGTATGCAAGCCCTCGTCTCTACTGATGAGCTCATTGGAAAATGTTAA 203994 Query 13719 TCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAA 13778 || |||||||| || ||||| || ||||||||||| || ||||| || || ||||| || Sbjct 203995 ACCGGGCATCAAGCCACGTTTCTTCAACCAAAATATGGCCGCGAAAGAACCAGAAAAAAA 204054 Query 13779 TATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGA 13838 ||| || || || |||||||| | || || || ||||| | | | | Sbjct 204055 TATGCCTTCGACACAGGCAAACGCCACGAGGCGACTCCCGAACGAAACGGTGGAATCTTC 204114 Query 13839 TATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATT 13898 | |||| ||||| || | ||||||||||| | |||| |||||| | || || Sbjct 204115 GACCCATCGCAATGCCCAATCCGCCTTTTTTTTAATGCAGTCCACTGTTTCAAGCGCGTT 204174 Query 13899 GAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACAT 13958 || | ||| | | ||| || | || ||| || || || || || ||| | Sbjct 204175 AAAGAGATGGGCTTGTTCTCGGGTGTCTTTAACGTAGGTGTCGATGAGCAAAGAATATGT 204234 Query 13959 TTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAA 14000 ||| || || | |||||| || ||||| ||||| || || Sbjct 204235 TTCTGAATGAACGTTTTCGATCATGATCTGGAAACCGTAGAA 204276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478586765997600