Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1 145 2e-29 seq113 132 1e-25 seq335 111 4e-19 seq286 109 1e-18 seq2 95.1 3e-14 >seq1 Length=2331425 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || ||||| || || || ||||| ||||||| ||||| Sbjct 482380 AAGAACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGGCCGTC 482439 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || ||||| || || || |||||||| | ||| ||||| ||||| || || || ||||| Sbjct 482440 CTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATC 482499 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 |||||||||||| || ||||| || | ||| ||| || || || || || || || || Sbjct 482500 CTGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCGACTTCCAGCGTGATCGT 482559 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || || | ||| || ||||| |||||||| Sbjct 482560 CTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 482592 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| ||||| || | ||| || || || || || || Sbjct 482168 GTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGACCATCCTCAAGCTGCTTGCCG 482227 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || | ||||||||||| || || ||||| || || || || || || || Sbjct 482228 GCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTTGTCTTGGATTTTCGCCTTG 482287 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | |||||| | ||| || || || || || ||||| || || || ||| Sbjct 482288 ACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGATGGTCTTGCCTGTCAGAGTT 482347 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 482348 TTGACGAAGATCTGCAT 482364 Score = 102 bits (112), Expect = 2e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||||||||| || || || | ||| | ||||| || | ||| || || ||||| Sbjct 481946 TCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAATTGCTTCCCGGCAAAG 482005 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| || |||||||| || || || |||||||||||||| || || ||||| Sbjct 482006 ATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTTCGCCTTCACATTG 482065 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||||| || || || || | || || ||||| || || | || || || Sbjct 482066 TCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCCGTCAAAGTCTTCACG 482125 Query 104549 AATATCTGCAT 104559 || || ||||| Sbjct 482126 AAGATTTGCAT 482136 >seq113 Length=2004859 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | ||||| || |||||||| ||||| || || ||||| | ||||| || || Sbjct 833605 AGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGC 833664 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || || || || || || | | ||| || ||||| || || || || || ||||| ||| Sbjct 833665 TGCTTGCCCGCGAAGATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATC 833724 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 |||||||| || || || | ||| ||| | || ||||| || ||||||||||| ||| Sbjct 833725 TTTGCTTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCA 833784 Query 104534 GTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || ||||| |||||||| Sbjct 833785 GTGAGGGTCTTGACAAAGATCTGCAT 833810 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || ||||| || ||||| | ||||| || || || || ||||||||| Sbjct 833337 TCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGAGCTGCTTCCCAGCAAAA 833396 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || | | |||||| ||||| || || || || || ||||||||||| || || ||||| Sbjct 833397 ATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACATTG 833456 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || || | ||| ||||| || ||||| ||||| || || || || || || Sbjct 833457 TCGATAGTGTCCGATGATTCGACCTCGAGGGTAATGGTCTTTCCCGTGAGCGTCTTGACG 833516 Query 104549 AATATCTGCAT 104559 || || ||||| Sbjct 833517 AAAATTTGCAT 833527 >seq335 Length=51571 Score = 111 bits (122), Expect = 4e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 269152 TGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGG 269211 ||| ||||| || ||||| || || || ||||| || ||| |||| | |||||| | || Sbjct 19886 TGTCGAAGGCATTTTCTTCTCCGGATCGTTTGCAGCGGTCTATTGGATCAAGAAACGGGG 19945 Query 269212 CCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTG 269271 ||||||||||| || |||||||| |||||| | || ||||| || ||||| | || Sbjct 19946 GCTTATGCCAGGTTTGACTTTCTCGAACGAACTAATCAGCAGAGATGAAGGGCTTCATAC 20005 Query 269272 CGACTTCGCTTGTTTATTATT 269292 ||||||||| |||||||| || Sbjct 20006 CGACTTCGCCTGTTTATTGTT 20026 >seq286 Length=987428 Score = 109 bits (120), Expect = 1e-18 Identities = 120/160 (75%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 269136 TAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTT 269195 ||||||| ||||| ||||| ||||| ||||||||||| ||||| |||||| | || || | Sbjct 834139 TAGTTGCCTTTGCTGCTGTGGAAGGGATATTCTTTTCTGGGTCGTTTGCCTCAATATTCT 834198 Query 269196 GGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGG 269255 || | |||||| | || |||||||| || | || || || || || | || || | | Sbjct 834199 GGATCAAGAAACGTGGTCTTATGCCTGGCCTGACATTTTCCAATGAGCTTATTAGTCGAG 834258 Query 269256 ACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTAC 269295 |||| || || ||| ||| ||||| ||| |||| || || Sbjct 834259 ACGAGGGCTTGCACACCGATTTCGCATGTCTATTGTTCAC 834298 >seq2 Length=2111947 Score = 95.1 bits (104), Expect = 3e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || || |||||| ||| ||||| ||||| ||||| || ||||| || || || |||||| Sbjct 204081 GTGGCGTTTGCCTGTGTCGAAGGCATATTTTTTTCTGGTTCTTTCGCGGCCATATTTTGG 204022 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||||| | ||| | ||||| || ||||| || || || || | || || || ||| Sbjct 204021 TTGAAGAAACGTGGCTTGATGCCCGGTTTAACATTTTCCAATGAGCTCATCAGTAGAGAC 203962 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGTTTATTATT 269292 || || || || || || |||||| | || || Sbjct 203961 GAGGGCTTGCATACGGATTTTGCTTGTCTTTTGTT 203927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151393384220720