Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq113 107 2e-18 >seq1 Length=2331425 Score = 118 bits (130), Expect = 1e-21 Identities = 155/213 (73%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCT 94856 |||| ||| | || || ||||| || | ||| || || |||| || || ||||| Sbjct 482156 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCG--ATAGGGTGCGACCATCCT 482213 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| || ||| |||| || | | ||| ||||| || ||||| ||||| ||||| | Sbjct 482214 CAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTTGTCTT 482273 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||||| ||||||||| | ||| ||| || | | ||||| || | |||||||| | Sbjct 482274 GGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGATGGTCT 482333 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | || || |||||||| || ||||||||||||| Sbjct 482334 TGCCTGTCAGAGTTTTGACGAAGATCTGCATGC 482366 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| || || || ||| | || |||| | |||||||| |||||||| || || || Sbjct 482438 TCCTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTA 482497 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||| ||||||||||| | ||| ||||| | ||||| || | |||||| Sbjct 482498 TCCTGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCGACTTCCAGCGTGATC 482557 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | || |||||||| |||||||| Sbjct 482558 GTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 482592 >seq113 Length=2004859 Score = 107 bits (118), Expect = 2e-18 Identities = 151/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 94798 CACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCT 94856 |||| || |||| |||||| ||||| || | |||||||||| | |||| |||| Sbjct 833600 CACCGAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCT 833659 Query 94857 CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 | ||||| || || | ||||| || | ||||| || || |||||||| || ||||| | Sbjct 833660 CGAGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCT 833719 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 || ||||| |||||| | ||| ||||| | ||||| || | || || || | Sbjct 833720 GGATCTTTGCTTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCT 833779 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | ||||| || || || |||||||||||||| Sbjct 833780 TCCCAGTGAGGGTCTTGACAAAGATCTGCAT 833810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448289294762400