Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq286 132 1e-25 seq308 102 2e-16 seq335 86.0 2e-11 >seq286 Length=987428 Score = 132 bits (146), Expect = 1e-25 Identities = 167/229 (73%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 22419 CACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACG 22478 |||||||| | || ||| || || |||||||| || |||||||| | ||| Sbjct 834059 CACCATTCCTTGCATCAAGCGCAAAGCTGATTGGGCTCTAAAATGGATTTCAGACAAACA 834118 Query 22479 TTCA---TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGG 22535 |||| || ||||||||||| |||| ||||||| || ||||| || ||||||||||| Sbjct 834119 TTCAACCTTTGCGGAACGTCTAGTTGCCTTTGCTGCTGTGGAAGGGATATTCTTTTCTGG 834178 Query 22536 AGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTC 22595 | ||| |||| || ||| | || ||||||| ||||||| || || || ||||| Sbjct 834179 GTCGTTTGCCTCAATATTCTGGATCAAGAAACGTGGTCTTATGCCTGGCCTGACATTTTC 834238 Query 22596 AAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 |||||| | ||||| ||||| ||||| | || |||||||| || ||| Sbjct 834239 CAATGAGCTTATTAGTCGAGACGAGGGCTTGCACACCGATTTCGCATGT 834287 Score = 89.7 bits (98), Expect = 1e-12 Identities = 146/207 (71%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGTTCA---TTCGCGGAACGTCTT 22497 |||||||| ||||| ||||| ||||| | | ||| ||| || | ||||| | Sbjct 832270 AAGGCAGACTGGGCACTGAACTGGATCTCCGACCGACGGTCAACTTTTGGTGAACGCTTG 832211 Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTG-CAATCTTTTG 22556 | || ||||||| ||||||||||| ||||| || || | ||| | | | ||||| || Sbjct 832210 GTGGCGTTTGCTGCTGTTGAAGGCATCTTCTTCTCGGGCTC-TTTCGCGTCCATCTTCTG 832152 Query 22557 GCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGA 22616 | | || || || | | ||||| || || || ||||| |||||| | |||||||| || Sbjct 832151 GATGAAGAAGCGAGGCTTGATGCCTGGCCTGACTTTTTCCAATGAGCTCATTAGCCGCGA 832092 Query 22617 TGAGGGTCTTCATACCGATTTTGCGTG 22643 || || | || ||||| ||||| || Sbjct 832091 CGAAGGAATGCACACCGACTTTGCATG 832065 >seq308 Length=957167 Score = 102 bits (112), Expect = 2e-16 Identities = 212/313 (68%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGA 363449 || |||| || || ||||| |||||||| |||| ||||||||||| | | ||| Sbjct 619591 TTTGGATTCAAAACTCTGGAGCGTTCCTACCT-TCTCCGTATCAATGGTCGAGTCGCTGA 619533 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 || || || || ||| | ||||| || || ||||||| ||| || | ||| | ||| Sbjct 619532 GCGGCCACAACACATGATTATGCGAGTCGCCGTTGGTATTCATGGCTCTGATATAGATCG 619473 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAAT 363569 | ||| || || || || || | || ||| |||||||| || |||| ||| | Sbjct 619472 TGTGATCGAGACGTACAACCTGATGTCTGAGCGTCACTTCACGCATGCATCGCCGACACT 619413 Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629 | |||||| ||||||| ||||| ||| | || ||||| ||| | ||||| || Sbjct 619412 TTTCAATGCCGGAACTCCCAATCCCCAGCTCAGCTCCTGCTTCCTTGTCTGCATGAAAGA 619353 Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689 || || || |||||||| | || || | || | |||||| | || ||| | || Sbjct 619352 TGACTCGATTGAGGGTATTTACGATACCTTGAAAAGTTGTGCCATGATCAGCAAAACGGC 619293 Query 363690 AGGCGGAATTGGT 363702 || ||||||||| Sbjct 619292 TGGAGGAATTGGT 619280 >seq335 Length=51571 Score = 86.0 bits (94), Expect = 2e-11 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 22513 GTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCA 22572 || |||||||||||||| || ||| | ||| || ||| |||| | || ||||| | Sbjct 19887 GTCGAAGGCATTTTCTTCTCCGGATCGTTTGCAGCGGTCTATTGGATCAAGAAACGGGGG 19946 Query 22573 ATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACC 22632 ||||||| ||| | || || || || || |||| ||| ||||||| || ||||||||| Sbjct 19947 CTTATGCCAGGTTTGACTTTCTCGAACGAACTAATCAGCAGAGATGAAGGGCTTCATACC 20006 Query 22633 GATTTTGCGTGT 22644 || || || ||| Sbjct 20007 GACTTCGCCTGT 20018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303347922265880