Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1 113 4e-20 seq113 95.1 1e-14 >seq1 Length=2331425 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || ||||| || || || |||| || | ||||||||| | | Sbjct 482592 ATGCAGATTTTTGTGAAGACATTGACCGGCAAGACGATCACGCTGGAAGTCGAGTCTTCC 482533 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||||| || || || ||||| ||||||||||| Sbjct 482532 GACACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCCGATCAG 482473 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || |||| || ||||||||||||||| || | | ||| | ||||| ||| Sbjct 482472 CAGCGCCTAATTTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTTTCTGATTACAAC 482413 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || || || || Sbjct 482412 ATCCAGAAGGAGTCAAC 482396 >seq113 Length=2004859 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | |||||| |||| |||||| | | Sbjct 833810 ATGCAGATCTTTGTCAAGACCCTCACTGGGAAGACTATTACCCTCGAGGTCGAGTCGTCC 833751 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| |||||| ||||| || || || || || || || Sbjct 833750 GACACCATCGACAACGTCAAAGCAAAGATCCAGGACAAGGAGGGTATTCCCCCTGACCAG 833691 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || |||||||| ||||| || | | | | |||||||||| Sbjct 833690 CAGCGTTTGATCTTCGCGGGCAAGCAGCTCGAGGACGGGCGCACTCTTTCCGATTATAAC 833631 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| || || ||||| Sbjct 833630 ATTCAGAAGGAGTCTAC 833614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429934218452700