Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq1 136 4e-27 seq113 125 7e-24 seq69 113 4e-20 seq284 82.4 7e-11 >seq1 Length=2331425 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| || || || | || | ||||||||||| || |||||||| || Sbjct 482138 CCACCGCGCAGGCGGAGAACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAT 482197 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| || | || | ||| || || || || || Sbjct 482198 AGGGTGCGACCATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGA 482257 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||||||| ||||| | || | |||||||| ||| |||| Sbjct 482258 ATCCCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACT 482317 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || |||||||| ||||| ||||||||| Sbjct 482318 TCGAGGGTGATGGTCTTGCCTGTCAGAGTTTTGACGAAGATCTGCATG 482365 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| || || || | || | || |||||||| || ||||||||||| Sbjct 482365 GCCACCACGCAGGCGAAGAACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGA 482424 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| || |||||||| ||| | |||| |||||||| || ||||| Sbjct 482425 AAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGG 482484 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 || || || || || ||| | | || ||||| | || | || |||| ||||||| Sbjct 482485 AATGCCCTCCTTATC-CTGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCGA 482543 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| | || || || ||||||||||| Sbjct 482544 CTTCCAGCGTGATCGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 482592 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| |||||| || | || | |||||||||||| |||||||| || || Sbjct 482877 GCCGCCACGCAGACGCAGGACAAGGTGAAGGGTCGACTCCTTCTGAATGTTATAGTCAGA 482936 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| |||||||| || ||| |||| | ||| |||||||| || || Sbjct 482937 TAGGGTTCGTCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGACGTTGCTGGTCGGGCGG 482996 Query 131127 GAT 131129 ||| Sbjct 482997 GAT 482999 >seq113 Length=2004859 Score = 125 bits (138), Expect = 7e-24 Identities = 148/198 (75%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| |||||||| |||||| | |||||| |||||| ||||||||||| Sbjct 833614 GTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGCTGCTTGCCC 833673 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGC-TT 131156 ||| |||| |||||||||||||| || || || || || ||||| ||| || ||| || Sbjct 833674 GCGAAGATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTT-TGCTTT 833732 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | || |||| ||||||| |||| ||||| || || || || || || Sbjct 833733 GACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCAGTGAGGGT 833792 Query 131217 TTTTACGAAAATCTGCAT 131234 || || || |||||||| Sbjct 833793 CTTGACAAAGATCTGCAT 833810 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| |||||||||||||| | ||||| || || |||||||| || Sbjct 833897 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCAGCTGCTTTCCG 833956 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || ||||| ||||| || ||||| || || ||||| ||| || |||| Sbjct 833957 GCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTG 834016 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||||| | |||||||| || | ||| | ||| || || || || ||| Sbjct 834017 ACGTTGTCAATGGTATCCGAGGACTCGACTTCCAGGGTGATGGTCTTTCCCGTCAGTGTT 834076 Query 131218 TTTACGAAAATCTGCAT 131234 || |||||||||||||| Sbjct 834077 TTGACGAAAATCTGCAT 834093 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| ||||||||||| || | |||||| |||||| |||||||| || || | Sbjct 833336 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGAGCTGCTTCCCAGCAAA 833395 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 || || ||||| ||||| || ||||| || || ||||| || ||| ||||| | Sbjct 833396 AATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACATT 833455 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | ||| || | || |||| |||| ||||| ||| || || || || || || || Sbjct 833456 GTCGATAGTGTCCGATGATTCGACCTCGAGGGTAATGGTCTTTCCCGTGAGCGTCTTGAC 833515 Query 131223 GAAAATCTGCAT 131234 |||||| ||||| Sbjct 833516 GAAAATTTGCAT 833527 >seq69 Length=731732 Score = 113 bits (124), Expect = 4e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || || || | || ||||||||||| |||||||| ||||| Sbjct 268726 CCACCACGCAGACGAAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTG 268785 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | |||||||||||| |||||| Sbjct 268786 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGG 268845 Query 131128 AT 131129 || Sbjct 268846 AT 268847 >seq284 Length=318945 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || || || | ||||||||||| || |||||||| ||||| | ||||| | Sbjct 114516 CGGAGGACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGGCCG 114457 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 ||||| ||||||||||| || |||| | ||||| ||||| || ||||| Sbjct 114456 TCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGCGGGAT 114407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010793945600