Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq286 174 2e-38 seq335 147 2e-30 seq2 147 2e-30 >seq286 Length=987428 Score = 174 bits (192), Expect = 2e-38 Identities = 377/560 (67%), Gaps = 7/560 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | |||||||| || || | ||||||| || || | Sbjct 832064 GCATGCAAAGTCGGTGTGCATTCCTTCGTCGCGGCTAATGAGCTCATTGGAAAAAGTCAG 832123 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || ||||| ||||| | ||| || || || || ||| || || || || Sbjct 832124 GCCAGGCATCAAGCCTCGCTTCTTCATCCAGAAGATGGACGCGAAAGAGCCCGAGAAGAA 832183 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTG-CGGAATTACTGC 93269 || ||||| || || ||||| ||||| | ||||| ||||| ||| | | | | Sbjct 832184 GATGCCTTCAACAGCAGCAAACGCCACCAAGCGTTCACCAAAAGTTGACCGTCGGTC-GG 832242 Query 93270 TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGT 93329 |||||| || | ||||| || || || ||| | ||| || | || || | |||| Sbjct 832243 AGATCCAGTTCAGTGCCCAGTCTGCCTTGCGCTTGACACACGGAATGGTCTCCACGGCGT 832302 Query 93330 TAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACA 93389 || ||||| || || ||| | | || || || || ||||| | || |||||| Sbjct 832303 CGAAAAGGTACTCGCGTTCGGCAGCGTCCTTGATATAGGTGTCGATGAGAAGCGAATACG 832362 Query 93390 TTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGA 93449 | || || || | |||||||| |||||||| || |||||||||| ||| || | | Sbjct 832363 TCTCTGAGTGAATGTTCTCCATCATGATTTGGAAGCCATAGAAACATCGAGCCTCGGCAA 832422 Query 93450 TCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTG 93509 || || || | ||||| | ||| || || || || ||||| |||||||| || |||| Sbjct 832423 CTTGGACCTCGTTGGAAAAGCGCTCGACAAGGTTCTCGTTGACAATACCATCCGAGGCTG 832482 Query 93510 CaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA----GCTTATCC 93565 | || ||||| | | ||| || ||||| ||| | || |||| | || | | Sbjct 832483 CGAAGAAAGCGAGGACATGGGAGATGAAATGGCGCTCGTTGTCGTTAAGGCGGGTTGT-C 832541 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || || | |||||| || || || | ||| || ||||||||||||| || || || Sbjct 832542 CAGTCATGAATATCTTTCGAGAGGTCCATTTCCTCTGCAGTCCAAAACGACGCCTCAGCC 832601 Query 93626 TTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 832602 TTCTTGTACATTTGCCAGAT 832621 >seq335 Length=51571 Score = 147 bits (162), Expect = 2e-30 Identities = 377/567 (66%), Gaps = 13/567 (2%) Strand=Plus/Minus Query 93084 ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGAT-ATCAACTCATTGCTG 93142 ||| ||| || || ||||||||||| | ||||| |||| || | || | || || | Sbjct 20025 ACAATAAACAGGCGAAGTCGGTATGAAGCCCTTCATCTC-TGCTGATTAGTTCGTTCGAG 19967 Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCA 93202 || || |||||||| | || || |||||||||| |||| | | | ||||| || Sbjct 19966 AAAGTCAAACCTGGCATAAGCCCCCGTTTCTTGATCCAATAGACCGCTGCAAACGATCCG 19907 Query 93203 GaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAA 93262 || || || || ||||| || || || ||||| | || |||| |||| | || Sbjct 19906 GAGAAGAAAATGCCTTCGACACAAGCGAAGGCCACCAAGCGCTCGGGAAAAATGCGGGTC 19847 Query 93263 TTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCG 93322 | | | ||||||||||| || || | ||||| || ||||||||| | || ||| Sbjct 19846 GGATCGTTAATCCATTTTAATGCACAGCCTGCTTTCCTCCGAATACAAGGAATGGTCTCG 19787 Query 93323 ATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGA 93382 || ||||| || || || || ||| | || || || || ||||| || |||| Sbjct 19786 ATGGCGTTGAACAGATAGGTCCGTTCGGCGCTGTCCCGAATATAGGTATCTATCAACAAG 19727 Query 93383 GAATACATTTCAGAATGGACATTCTC---CATTGCAATTTGGAATCCGTAGAAACATCTA 93439 ||||| ||| || || |||||||| ||||| | || || ||||| ||| | | Sbjct 19726 GAATATGCTTCGGAGTGAACATTCTCGATCATTG---TCTGAAAACCGTAAAAAGAACGG 19670 Query 93440 G-CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 | || || || | | | ||| ||||||| | || | |||||||| ||||| || || Sbjct 19669 GCCTCCCATGGACCG-ATCTCTCGAGAAAACCGTTCCAAAAGATTTTCGTTGACGATGCC 19611 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCAT---CTTT 93555 ||||| || ||||| || |||| | || | |||||| | ||||| | | Sbjct 19610 GTCGGAGGCAGCAAAGAATGCCAGCACGTGTGACAAAAAATGCCTGTCATCGTTTGATAG 19551 Query 93556 AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 | | | |||||||| | | ||| |||||| | ||| || || ||||||||||| Sbjct 19550 ACGTTGGTCCCAATCCGCCAAATCGGAACGAAGATCAAGTTCGTCAACGGTCCAAAACGA 19491 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCA 93642 | || ||||| || ||||| | ||| Sbjct 19490 CGACTCCGCTTTCTTATACATCTGCCA 19464 >seq2 Length=2111947 Score = 147 bits (162), Expect = 2e-30 Identities = 296/432 (69%), Gaps = 8/432 (2%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || ||||| || ||||| || || ||||||| || | ||||||| ||||||||| Sbjct 203936 CAAGCAAAATCCGTATGCAAGCCCTCGTCTCTACTGATGAGCTCATTGGAAAATGTTAAA 203995 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || || |||||||| | ||||||||| | || ||| ||||||||||||| Sbjct 203996 CCGGGCATCAAGCCACGTTTCTTCAACCAAAATATGGCCGCGAAAGAACCAGAAAAAAAT 204055 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACG--TTCGGCA-AAATTTGCGGAATTACTG 93268 || ||||| || ||||| ||||| | || | | | | || | ||||| || Sbjct 204056 ATGCCTTCGACACAGGCAAACGCCACGAGGCGACTCCCGAACGAAACGGTGGAAT--CTT 204113 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 | || |||| || |||||||| || ||||| ||||| || | |||||| | ||| Sbjct 204114 C-GACCCATCGCAATGCCCAATCCGCCTTTTTTTTAATGCAGTCCACTGTTTCAAGCGCG 204172 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 ||||| || | || | || | ||| | ||| || ||||| | || |||||| Sbjct 204173 TTAAAGAGATGGGCTTGTTCTCGGGTGTCTTTAACGTAGGTGTCGATGAGCAAAGAATAT 204232 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCC-GT 93447 |||| ||||| || || || || || ||||| |||||||| | | || ||| | Sbjct 204233 GTTTCTGAATGAACGTTTTCGATCATGATCTGGAAACCGTAGAAGGAGCGCGCCTCCAGA 204292 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 | || || || |||||| | | ||||||||||| || || || ||||| || || Sbjct 204293 GGTC-CAACCTCGCAAGAAAAGTTTTGAACGAGATTTTCGTTCACGATGCCATCAGACGC 204351 Query 93508 TGCaaaaaaaGC 93519 |||||||| || Sbjct 204352 GGCAAAAAAGGC 204363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556858433341600