Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1 109 5e-19 seq113 104 2e-17 >seq1 Length=2331425 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| | || | ||| || || || || ||||||||||| Sbjct 482363 ATGCCACCACGCAGGCGAAGAACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCA 482422 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || || || ||||| || || ||| | || || ||||| || || ||| Sbjct 482423 GAAAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGA 482482 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || || || ||||||| || | | || | |||||||| || ||| Sbjct 482483 GGAATGCCCTCCTTATCCTGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCG 482542 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||| |||||||||| || || |||||||||||||| Sbjct 482543 ACTTCCAGCGTGATCGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 482592 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | ||| | || | ||| || || || || |||||||| || Sbjct 482135 ATACCACCGCGCAGGCGGAGAACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCC 482194 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||| ||||| || || || || | |||||||| ||||| || || Sbjct 482195 GATAGGGTGCGACCATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGC 482254 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||| ||||| || || || | | || | || |||| ||||||| Sbjct 482255 GGAATCCCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCG 482314 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | || ||||| ||||||||||| || || ||||||||| Sbjct 482315 ACTTCGAGGGTGATGGTCTTGCCTGTCAGAGTTTTGACGAAGATCTGCATG 482365 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || ||||| |||||||| || |||||| || || | ||| || || || || Sbjct 481946 TCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAATTGCTTCCCGGCAAAG 482005 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 ||||| ||||| ||||| ||||||||||| || || || |||||| || | | Sbjct 482006 ATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTTCGCCTTCACATTG 482065 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 |||| || || | || ||||| |||| || | ||| || || |||| ||| || || Sbjct 482066 TCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCCGTCAAAGTCTTCACG 482125 Query 114372 AAAATCTGCAT 114382 || || ||||| Sbjct 482126 AAGATTTGCAT 482136 >seq113 Length=2004859 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || |||||||||||||| | ||| ||| |||||| || || || || Sbjct 833897 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCAGCTGCTTTCCG 833956 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | ||||||||||| || || || || || ||||| ||||| || Sbjct 833957 GCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTG 834016 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||| || | ||| ||||| |||| ||| | || || || ||||| ||| Sbjct 834017 ACGTTGTCAATGGTATCCGAGGACTCGACTTCCAGGGTGATGGTCTTTCCCGTCAGTGTT 834076 Query 114366 TTTACAAAAATCTGCAT 114382 || || ||||||||||| Sbjct 834077 TTGACGAAAATCTGCAT 834093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420132659068080