Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq1 116 3e-21 >seq1 Length=2331425 Score = 116 bits (128), Expect = 3e-21 Identities = 150/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Plus Query 33925 TGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCGTCGTCCAATTGC 33984 ||||| ||||||||||||||||| |||||||| | ||| ||| |||| ||||||||| Sbjct 481934 TGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAATTGC 481993 Query 33985 TTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTGTCCATAATTTTT 34044 || |||||||| || ||||||||||| || || | || ||| || ||| ||| || Sbjct 481994 TTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTTC 482053 Query 34045 TGCTT---AATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTTATTGTTTTTCCG 34101 ||| | || | || |||| | ||| ||| ||| | ||| || || ||||| Sbjct 482054 GCCTTCACATTGTCAATC---GTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCC 482110 Query 34102 GTTAGTGTTTTCACAAAGATTTGCAT 34127 || | || ||||| ||||||||||| Sbjct 482111 GTCAAAGTCTTCACGAAGATTTGCAT 482136 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| || || || || || ||||| ||||||||| ||||||||||| | Sbjct 482366 CCACCACGCAGGCGAAGAACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAA 482425 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | ||| |||| || | |||||||||||| || || |||||||||||||| || Sbjct 482426 AGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGA 482485 Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTT--AATGGAACTC-ACACTATCAGTAGATTCG 34077 | || ||| || ||| ||| ||| ||| || | || | | || | ||| ||| Sbjct 482486 ATGCCCTCCTTATCCTGAATCTTTGCCTTGACATTG---TCGATGGTGTCGGAAGACTCG 482542 Query 34078 CATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 ||| | ||| || || || ||||| | ||| |||||||| || ||||| Sbjct 482543 ACTTCCAGCGTGATCGTCTTGCCGGTCAATGTCTTCACAAAAATCTGCAT 482592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397060754672680