Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq113 84.2 2e-11 >seq1 Length=2331425 Score = 104 bits (114), Expect = 2e-17 Identities = 144/198 (73%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| || |||||||| || | ||| || |||||||||||| || |||| Sbjct 482397 TTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGG 482456 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTT 138536 | ||||| ||||| || || ||||| || || || || || ||| | |||| || Sbjct 482457 CGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATC-CTGAATCTTTGCCTTG 482515 Query 138537 TAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGT 138596 |||| || | |||||||| ||||| || || | ||| | ||| || || |||| || Sbjct 482516 ACATTG-TCGATGGTGTCGGAAGACTCGACTTCCAGCGTGATCGTCTTGCCGGTCAATGT 482574 Query 138597 TTTTACAAAAATCTGCAT 138614 || |||||||||||||| Sbjct 482575 CTTCACAAAAATCTGCAT 482592 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/197 (70%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG--TCCTCGAGTTGTTTACCGG 138478 |||||||| || ||||||||||| |||| |||| ||||| || || || |||| Sbjct 482171 GACTCCTTCTGGATGTTGTAGTCCG--ATAGGGTGCGACCATCCTCAAGCTGCTTGCCGG 482228 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | | || ||||| ||||| || || || || ||||| ||||| |||||| || | Sbjct 482229 CAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTTGTCTTGGATTTTCGCCTTGA 482288 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | || | || |||| || || || |||| || | || || || |||||||||| Sbjct 482289 CGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGATGGTCTTGCCTGTCAGAGTTT 482348 Query 138599 TTACAAAAATCTGCATG 138615 | || || ||||||||| Sbjct 482349 TGACGAAGATCTGCATG 482365 >seq113 Length=2004859 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| |||||||||||||| | ||| ||| ||||||||| || || || | | | Sbjct 833336 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGAGCTGCTTCCCAGCAAA 833395 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG--TTTTAAT 138540 || | ||||||||||| || || ||||| || ||||| ||| | || | || || Sbjct 833396 AATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTC-CTGAATCTTCGCCTTGACAT 833454 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | ||||| | || || ||||||| || | || || || || || || || Sbjct 833455 TG-TCGATAGTGTCCGATGATTCGACCTCGAGGGTAATGGTCTTTCCCGTGAGCGTCTTG 833513 Query 138601 ACAAAAATCTGCAT 138614 || ||||| ||||| Sbjct 833514 ACGAAAATTTGCAT 833527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496260290884800