Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq319 91.5 2e-13 >seq319 Length=928647 Score = 91.5 bits (100), Expect = 2e-13 Identities = 209/310 (67%), Gaps = 6/310 (2%) Strand=Plus/Plus Query 176671 ATCCGTCATAATCATGAGCCGACCATAGCG-AAGCTC--GGAAACATCTTGATAATCCTT 176727 ||| |||||||||||||| || ||||| || |||||| || | || || |||||||| Sbjct 701844 ATCAGTCATAATCATGAGTCGCCCATACCGCAAGCTCATGGTAT--TCGTG-TAATCCTT 701900 Query 176728 ACCTTGTTGAAGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTTTGATGTGAGTTG 176787 ||||| | |||| |||||||||| || | || |||| ||| ||| ||| Sbjct 701901 GTTATGTTGCAATCCCATGATCTTCTTGATATTCTGGATTTCTTCGTTCTTCATGATTTG 701960 Query 176788 CGCCACTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACCGTAGTG 176847 | | | || || ||||| || |||| ||||| || |||||||||||| | | Sbjct 701961 CTCATGTCGCGCCTCACGGACGTTAAGCAACTTGCCGCGAAGGGGGAACACACCGAAATT 702020 Query 176848 ATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGT 176907 || | ||||| || |||||||| || || |||| || ||||| || || || || Sbjct 702021 GTCTCTGCCAACGACTCCAAGACCAGCTACCGCCAGGGCTTTAGCGGAGTCTCCTTCGGT 702080 Query 176908 CACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCGTCCAACTT 176967 | || || || || || | ||| || ||||| ||||| |||||| | ||| Sbjct 702081 GAGAATCAGGGTGCAGTTCTTCGCGTGTTTGGTTCCCGCGTTGTTGGCATCGGATAGCTT 702140 Query 176968 GGGAATACCA 176977 || | |||| Sbjct 702141 GGTCAAACCA 702150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504592594400