Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq286 259 5e-64 seq2 179 4e-40 seq1 131 2e-25 seq113 107 2e-18 seq69 100 3e-16 seq284 95.1 1e-14 >seq286 Length=987428 Score = 259 bits (286), Expect = 5e-64 Identities = 392/554 (71%), Gaps = 13/554 (2%) Strand=Plus/Plus Query 132894 GCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAA 132953 ||| ||||||||| |||| || ||||| | | |||||| || ||| ||||||| Sbjct 832064 GCATGCAAAGTCGGTGTGCATTCCTTCGTCGCGGCTAATGAGCTCATTGGAAAAAGTCAG 832123 Query 132954 GCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAA 133013 ||| ||||| | ||| || || || | ||| || |||| |||||| |||||| ||||| Sbjct 832124 GCCAGGCATCAAGCCTCGCTTCTTCATCCAGAAGATGGACGCGAAAGAGCCCGAGAAGAA 832183 Query 133014 GACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGC 133073 || ||| || || || || || ||||||| ||| || || || || | | | || Sbjct 832184 GATGCCTTCAACAGCAGCAAACGCCACCAAGCGTTCACCAAAAGTTGACCGTCGGTCGGA 832243 Query 133074 GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTT 133133 ||||||| ||| ||||| || ||||| ||||| ||||| || || || | ||||| Sbjct 832244 GATCCAGTTCAGTGCCCAGTCTGCCTTGCGCTTGACACACGGAATGGTCTCCACGGCGTC 832303 Query 133134 CAACAAACGGAGTTTCTCTTCCGAGGAACGCACGT-----AGGTGTCGATGAGGGTCGAA 133188 || || | | | | | | || | | || | | ||||||||||||| |||| Sbjct 832304 GAA--AAGGTACT--CGCGTTCG-GCAGCGTCCTTGATATAGGTGTCGATGAGAAGCGAA 832358 Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCG 133248 ||| | || ||||| | ||||||||| |||||| ||||| || || || || |||||| Sbjct 832359 TACGTCTCTGAGTGAATGTTCTCCATCATGATTTGGAAGCCATAGAAACATCGAGCCTCG 832418 Query 133249 ACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTG 133308 | || || || || | | || |||||||| || || |||||||| || || || | Sbjct 832419 GCAACTTGGACCTCGTTGGAAAAGCGCTCGACAAGGTTCTCGTTGACAATACCATCCGAG 832478 Query 133309 GCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---C 133365 || ||||| || || || || || |||||||||||||||||||||||| | ||| Sbjct 832479 GCTGCGAAGAAAGCGAGGACATGGGAGATGAAATGGCGCTCGTTGTCGTTAAGGCGGGTT 832538 Query 133366 TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCG 133425 |||||| | | || || || ||||||| ||||| | ||||||||||||||||| Sbjct 832539 GTCCAGTCATGAATATCTTTCGAGAGGTCCATTTCCTCTGCAGTCCAAAACGACGCCTCA 832598 Query 133426 GCTTTTTTGTACAT 133439 || || |||||||| Sbjct 832599 GCCTTCTTGTACAT 832612 Score = 143 bits (158), Expect = 3e-29 Identities = 374/563 (66%), Gaps = 17/563 (3%) Strand=Plus/Minus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||||| | || || || ||| |||||||||||||| | ||| || || ||| Sbjct 834297 TGAACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGG 834238 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 || |||| ||| ||||| || || ||||| |||| ||| ||||| | ||| |||| | Sbjct 834237 AAAATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGC-AAACGAC 834179 Query 133004 CC-GAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCT 133062 || |||||||| | || || || || || || || || || || || | || || | Sbjct 834178 CCAGAAAAGAATATCCCTTCCACAGCAGCAAAGGCAACTAGACGTTCCGCAAAGGTTGAA 834119 Query 133063 TCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTT 133122 | |||| | ||||| || ||||| || || || |||| ||| || || || Sbjct 834118 TGTTTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTG 834059 Query 133123 TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGGTGTCGATGA 133180 || ||||||| || || | | | || | | ||| | | |||| ||||| | Sbjct 834058 TCTATGGCGTCGAA--AAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAA 834001 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 | ||||||| |||| || || | |||||||| |||||||||||| || ||| | | Sbjct 834000 GCAACGAATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAAC 833941 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300 |||||||| ||||||||||| | || | ||||| || || ||||| || |||| Sbjct 833940 GCGCCTCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGC 833881 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTC------GTTGT 133354 | || ||| || || || || || || ||| || |||| ||||| |||| Sbjct 833880 CATCTGAGGCCGCAAAGAAAGCAAGAACATGCGATATAAAATACCGCTCATCATGGTTGA 833821 Query 133355 CGTTCAAGCGCTCCCAGTCGCGCG-TGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAA 133413 || ||| | |||||| | || ||| | ||| ||||| | || || | ||||| Sbjct 833820 GATTGAAG---TTCCAGTC-CACGAAGTCATGGGAAAGGTCAAGTTCTTCAGCTGTCCAG 833765 Query 133414 AACGACGCCTCGGCTTTTTTGTA 133436 || || || | ||||| ||||| Sbjct 833764 AATGAGGCTTGAGCTTTCTTGTA 833742 >seq2 Length=2111947 Score = 179 bits (198), Expect = 4e-40 Identities = 387/568 (68%), Gaps = 27/568 (5%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 |||||||| || ||||||||||||||| || ||||| || ||| || || || Sbjct 203936 CAAGCAAAATCCGTATGCAAGCCCTCGTCTCTACTGATGAGCTCATTGGAAAATGTTAAA 203995 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 |||||||| | ||| ||||| || | |||||||||||| |||||| || ||||| || Sbjct 203996 CCGGGCATCAAGCCACGTTTCTTCAACCAAAATATGGCCGCGAAAGAACCAGAAAAAAAT 204055 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCG-CTCGCCGAAC------GTGGCTTCTTT 133067 | ||| ||||| || || ||||| ||||| ||| |||||| |||| |||| Sbjct 204056 ATGCCTTCGACACAGGCAAACGCCACGAGGCGACTC-CCGAACGAAACGGTGGAATCTT- 204113 Query 133068 GCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGAT 133127 ||| ||| |||| ||||| || ||||||| ||| | ||| || ||||| | Sbjct 204114 -----CGACCCATCGCAATGCCCAATCCGCCTTTTTTTTAATGCAGTCCACTGTTTCAAG 204168 Query 133128 GGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGA 133187 ||||| || | | || || ||| | | ||||||||||||||||| || Sbjct 204169 CGCGTTAAAGAGATGGGCTTGTTCTCGGGTGTCTTTAACGTAGGTGTCGATGAGCAAAGA 204228 Query 133188 ATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTC 133247 ||| |||| || || ||||| || || ||| || || ||||| ||| | |||||||| Sbjct 204229 ATATGTTTCTGAATGAACGTTTTCGATCATGATCTGGAAACCGTAGAAGGAGCGCGCCTC 204288 Query 133248 GACCACCTGC-ACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306 | | | | || || || || | || ||||||||||| |||||||| || Sbjct 204289 CA-GAGGTCCAACCTCGCAAGAAAAGTTTTGAACGAGATTTTCGTTCACGATGCCATCAG 204347 Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAG-CG- 133364 ||||| |||||||| || ||| | ||||||| ||||| ||| | | ||| || Sbjct 204348 ACGCGGCAAAAAAGGCGAGGACGCGGGTGATGAAGAAACGCTCCTTG-CTTGAAAGACGA 204406 Query 133365 --CTCCCAGTCGCGCGTGTCCTTGGAC---AGGTCCACCTCCTCGACGGTCCAAAACGAC 133419 |||||| |||| | | | ||| ||||| | || || || |||||||| || Sbjct 204407 AACTCCCAATCGC-CAAG--ATCAGACCGGAGGTCGAGTTCGTCAACTGTCCAAAAAGAA 204463 Query 133420 GCCTCGGCTTTTTTGTACATACTCCACA 133447 || ||||| || |||||||| ||||| Sbjct 204464 GCTTCGGCCTTCTTGTACATCAACCACA 204491 >seq1 Length=2331425 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || || ||||| ||||||||| |||| ||||| || || Sbjct 482364 ATGCAGATCTTCGTCAAAACTCTGACAGGCAAGACCATCACCCTCGAAGTCGAATCCTCC 482305 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || | ||||||| ||||| || || ||||| | || || Sbjct 482304 GATACTATCGACAACG-TCAAGGCGAAAATCCAAGACAAGGAAGGGATTCCGCCTGATCA 482246 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || ||||||| || ||||| ||||| || || | |||||||| |||||||| Sbjct 482245 ACAACGTCTCATTTTTGCCGGCAAGCAGCTTGAGGATGGTCGCACCCTATCGGACTACAA 482186 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| ||||||| || |||| || || Sbjct 482185 CATCCAGAAGGAGTCGACGCTCCACCTGGTTCTCCG 482150 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || ||||| || ||||| | || |||||| | || Sbjct 482592 ATGCAGATTTTTGTGAAGACATTGACCGGCAAGACGATCACGCTGGAAGTCGAGTCTTCC 482533 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | ||| || | || || ||||| ||||| |||| || Sbjct 482532 GACACCATCGACAATGTCAAGGCAAAGATTCAGGATAAGGAGGGCATTCCTCCCGATCAG 482473 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| ||| ||||| || || || |||| || || || || |||||| Sbjct 482472 CAGCGCCTAATTTTCGCCGGCAAGCAACTCGAGGACGGCCGAACTCTTTCTGATTACAAC 482413 Query 38424 ATCCAAAAGGAAGCGACGCTGCA 38446 ||||| ||||| | ||||| || Sbjct 482412 ATCCAGAAGGAGTCAACGCTCCA 482390 >seq113 Length=2004859 Score = 107 bits (118), Expect = 2e-18 Identities = 154/213 (72%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| || ||||| || ||||||||| | || |||||| || | Sbjct 834093 ATGCAGATTTTCGTCAAAACACTGACGGGAAAGACCATCACCCTGGAAGTCGAGTCCTCG 834034 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 834033 GATACCATTGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCA 833975 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | ||| || || |||||||| || | ||||| || || ||||| Sbjct 833974 ACAGCGCTTGATCTTCGCCGGAAAGCAGCTGGAAGATGGTCGCACTCTTTCTGATTACAA 833915 Query 38423 CATCCAAAAGGAAGCGACGCTGCA-TTTGGTGC 38454 ||| || ||||| | || || || ||||||| Sbjct 833914 CATTCAGAAGGAGTCCACTCTTCACCTTGGTGC 833882 Score = 105 bits (116), Expect = 7e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||||||||| || ||||| ||| |||| ||||| | | Sbjct 833527 ATGCAAATTTTCGTCAAGACGCTCACGGGAAAGACCATTACCCTCGAGGTCGAATCATCG 833468 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || || | ||||| ||||| || ||| | |||||| Sbjct 833467 GACACTATCGACAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGACCAA 833408 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | |||| || || || ||||| || |||| |||||| || ||||||||| Sbjct 833407 CAGCGCTTGATTTTTGCTGGGAAGCAGCTCGAGGACGGGCGCACTCTTTCGGACTACAAC 833348 Query 38424 ATCCAAAAGGA 38434 || || ||||| Sbjct 833347 ATTCAGAAGGA 833337 >seq69 Length=731732 Score = 100 bits (110), Expect = 3e-16 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415 ||||||| ||||| || || | ||| ||||| |||||||| || | |||||||||| || Sbjct 268840 CCGACCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCACCCTCAGCG 268781 Query 38416 ACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||||||||| | || || || ||||| || ||| || | || || Sbjct 268780 ACTACAACATCCAAAAGGAGTCCACTCTCCACTTGGTCCTTCGTCTGCGTGGTGG 268726 >seq284 Length=318945 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/109 (80%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 ||||||| ||||||||||| || || | || ||||| ||||| || |||| ||||| | Sbjct 114408 TCCCGCCCGACCAACAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGCCGCACTC 114467 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| ||||||||||||||| ||||| |||| || || ||||| || || Sbjct 114468 TCAGCGACTACAACATCCAGAAGGAGTCGACACTTCACTTGGTCCTCCG 114516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170674265600