Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 5e-14 >seq2 Length=2111947 Score = 93.3 bits (102), Expect = 5e-14 Identities = 278/419 (66%), Gaps = 14/419 (3%) Strand=Plus/Minus Query 101902 TCCTGGCATTCTTTGCTGGGTCCGATGGAATTGTTTTTGAGAATATCAATAACAACTTTG 101961 |||| || || ||||| | ||| ||||| || || || ||| || | | |||||| Sbjct 204368 TCCTCGCCTTTTTTGCCGCGTCTGATGGCATCGTGAACGAAAATCTCGTTCAAAACTTTT 204309 Query 101962 CTGATGAGGTGCAATCCTCTGAAG-CGAGATCTTTCTATGCGTATCAATGTCATAAT-GA 102019 || ||||| | |||||| || || | || ||||| | || || | |||| || || Sbjct 204308 CTTGCGAGGTTGGA-CCTCTGGAGGCGCGCTCCTTCTACG-GTTTCCAGATCATGATCGA 204251 Query 102020 AATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGA 102079 || || ||| || ||||| | ||||| |||| || |||| || | || Sbjct 204250 AAACGTTCATTCAGAAACATATTCTTTGCTCATCGACACCTACGTTAAAGACAC--CCGA 204193 Query 102080 GAAGAAGC--AGCTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGAT 102137 ||| |||| | |||||| | || | ||||||| || ||| |||| || |||||| Sbjct 204192 GAACAAGCCCATCTCTTTAACGCGCTTGAAACAGTGGACTGCATTAAAAAAAAGGCGGAT 204133 Query 102138 TGGGCTATGAAGTGGTTTGATACAAAGTC--GCGTTCCTTTGCTGAG-CGACTCTTCGCA 102194 ||||| || ||| | || | | || |||| | || ||| || ||| | || Sbjct 204132 TGGGCATTGCGATGGGTCGA---AGATTCCACCGTTTCGTTCGGGAGTCGCCTCGTGGCG 204076 Query 102195 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAG 102254 ||||| ||||| || || || || || |||||||| ||| || || | |||| | ||| Sbjct 204075 TTTGCCTGTGTCGAAGGCATATTTTTTTCTGGTTCTTTCGCGGCCATATTTTGGTTGAAG 204016 Query 102255 AAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 102313 || || || | ||||| ||| | || ||||| ||||| ||| | | |||||||| Sbjct 204015 AAACGTGGCTTGATGCCCGGTTTAACATTTTCCAATGAGCTCATCAGTAGAGACGAGGG 203957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739761844800