Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq308 96.9 4e-15 seq1 93.3 5e-14 >seq308 Length=957167 Score = 96.9 bits (106), Expect = 4e-15 Identities = 200/293 (68%), Gaps = 6/293 (2%) Strand=Plus/Plus Query 110104 TCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCA 110163 || || |||||||| ||||||| || ||||| ||||| |||||| || || ||||| Sbjct 618346 TCGGCCAGACCCTGCACACCGATTCCGATGGGTCGATGGCGCATGTTTGACCGCCGAGCC 618405 Query 110164 GTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTC 110223 || || || ||||| ||| ||||| ||||| ||||| | ||| || Sbjct 618406 TCGGGAACAGGATAGTAGTTGACGTCAATGACTCGATTCAGATTGAAGGCAACAACTTTG 618465 Query 110224 GTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACATATTTGGGG 110283 |||| || ||||| || | | ||||| ||| ||| || | || || || ||||| Sbjct 618466 GTGACATCGTGGAGCTTCTTAAAGTCGAAT-TTTCCGT-TCGTGAT-GA---ATGTGGGG 618519 Query 110284 AGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATT 110343 ||||| | ||| ||||| || || || | || ||||| | || |||||| | ||| Sbjct 618520 AGAGCCAGAGAGGCAAGGTTACAAACGGCGGTTTCGTCAGGGGAGGAGTATTCGATGATT 618579 Query 110344 TCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTT 110396 || || || | || || || ||| ||| | |||||||||||||||||| Sbjct 618580 TCTGTGCAGAGATTCGAGGATTTGATGGTACCAAGGTTCTTCTGATTCGATTT 618632 >seq1 Length=2331425 Score = 93.3 bits (102), Expect = 5e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 11761 CCAACACCTACGAACATCTCAACGAAGTTTGCGGCAGAACACTGA-ATGAAGGGAACATT 11819 ||||| || || |||||||| ||||| | | | |||| || || | ||| || || Sbjct 1187198 CCAACTCCAACAAACATCTCGACGAACTCAGAGCCAGAT-ACGGACAGGAATGGCACGGA 1187140 Query 11820 AGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAG 11879 | || ||||| | || ||||||||||| |||||||| || |||| |||| ||| Sbjct 1187139 GGCTTCGCCAGCAGTTGCCTTCGCGAGGAGAGTTTTACCCGTGCCCGGTGGTCCAGAGAG 1187080 Query 11880 AAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAA 11939 || ||||||||| |||||||||||||| || || | |||||| ||||||||| Sbjct 1187079 AATGGCGCCACGAGGGATCTTGGCACCTAATCTCTCATATTGGGCAGGCTCCTTGAGGAA 1187020 Query 11940 GTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 | || | |||| || || ||||| || Sbjct 1187019 TTTGACGAACTCCATAATCTCTTCCTTTGC 1186990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588973496852000