Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq113 172 1e-37 seq1 145 2e-29 >seq113 Length=2004859 Score = 172 bits (190), Expect = 1e-37 Identities = 163/208 (78%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 194933 CAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGA 194992 ||||||||||||||||||| || ||||| |||||||| | |||||| | |||||||| | Sbjct 833886 CAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCA 833945 Query 194993 GCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAA 195052 ||||||| || |||||||| | || |||||||| || || || || || ||||| || | Sbjct 833946 GCTGCTTTCCGGCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGA 834005 Query 195053 TTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTC 195112 | || ||||||||| |||||||| ||||| || ||||| ||||| | ||||||| Sbjct 834006 TCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACTTCCAGGGTGATGGTCTTTC 834065 Query 195113 CTGTCAAAGTTTTTACGAACACTTGCAT 195140 | |||| ||||| ||||| | ||||| Sbjct 834066 CCGTCAGTGTTTTGACGAAAATCTGCAT 834093 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 |||||||||||| ||| || ||||| ||||| || | |||||| | ||| || |||||| Sbjct 833322 AGGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGAGC 833381 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || || || || | || |||||||| || || || || || ||||| ||||| Sbjct 833382 TGCTTCCCAGCAAAAATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATC 833441 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 || |||||| || || || |||||||| ||| || || ||||||| |||||||| Sbjct 833442 TTCGCCTTGACATTGTCGATAGTGTCCGATGATTCGACCTCGAGGGTAATGGTCTTTCCC 833501 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | |||||| Sbjct 833502 GTGAGCGTCTTGACGAAAATTTGCAT 833527 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 194935 AGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGC 194994 || || ||||| ||||| || ||||| || ||||||| |||||| | ||| || |||||| Sbjct 833605 AGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGC 833664 Query 194995 TGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATT 195054 ||||| || |||||||| | || || ||||| || ||||| || || ||||| || || Sbjct 833665 TGCTTGCCCGCGAAGATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATC 833724 Query 195055 TTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114 ||| |||||||| || |||||||| || || || || ||||||| ||||| || Sbjct 833725 TTTGCTTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCA 833784 Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || || || | ||||| Sbjct 833785 GTGAGGGTCTTGACAAAGATCTGCAT 833810 Score = 102 bits (112), Expect = 2e-16 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| ||||| ||||||||||| ||||| ||||| || | || || | |||||||||| Sbjct 834113 ACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAGAGGGTACGCCCATCTTCG 834172 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||||||| || || ||||| || || |||||||| || || |||| Sbjct 834173 AGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGGCGGGATGC 834218 >seq1 Length=2331425 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| ||||| || || ||||| || || || |||||||| | |||||||| || || || Sbjct 482383 AACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGGCCGTCCTC 482442 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||| ||||| || ||||| || || || || || || ||||||||||| || || || || Sbjct 482443 GAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCTG 482502 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| ||| |||||| || || |||||||| ||| || ||||| || || | |||||| Sbjct 482503 AATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCGACTTCCAGCGTGATCGTCTT 482562 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || || || | ||||| Sbjct 482563 GCCGGTCAATGTCTTCACAAAAATCTGCAT 482592 Score = 138 bits (152), Expect = 3e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| ||| ||| || |||||||||||||| | | ||| | ||| || || | || Sbjct 481933 GTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAATTG 481992 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || || ||||| ||||||||||| || || || ||||| || Sbjct 481993 CTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTT 482052 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || ||||| || |||||| || ||||| | || | ||||||||| || Sbjct 482053 CGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCCGT 482112 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 |||||| || ||||| | |||||| Sbjct 482113 CAAAGTCTTCACGAAGATTTGCAT 482136 Score = 111 bits (122), Expect = 3e-19 Identities = 87/104 (84%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| |||||||| || || || ||||| |||| |||||| | ||||| || Sbjct 482612 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCCTCA 482671 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 |||||||| || ||||||||||| ||||||||||| ||||| || Sbjct 482672 AGCTGCTTTCCAGCGAAGATAAGGCGTTGTTGGTCGGGAGGGAT 482715 Score = 93.3 bits (102), Expect = 9e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| || ||||| || ||||| || || || | || |||| || || ||| Sbjct 482896 ACAAGGTGAAGGGTCGACTCCTTCTGAATGTTATAGTCAGATAGGGTTCGTCCGTCCTCG 482955 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||||||| || ||||||||||| ||||| ||||| || || |||| Sbjct 482956 AGCTGCTTTCCGGCGAAGATAAGACGTTGCTGGTCGGGCGGGATGC 483001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109476766820780