Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-12 >seq1 Length=2331425 Score = 89.7 bits (98), Expect = 4e-12 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || ||||| || | ||| || | ||| ||||| || || ||||||||||| || | | Sbjct 482183 ATGTTGTAGTCCGATAGGGTGCGACCATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGT 482242 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || |||||||| ||||| ||||| || ||||| ||||| || || || || ||| Sbjct 482243 TGTTGATCAGGCGGAATCCCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTA 482302 Query 563413 TCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 || | | || | | |||||| || | || || || || |||||||| ||||| || || Sbjct 482303 TCGGAG-GATTCGACTTCGAGGGTGATGGTCTTGCCTGTCAGAGTTTTGACGAAGATCTG 482361 Query 563472 CAT 563474 ||| Sbjct 482362 CAT 482364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029278019266600