Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31]
340 sequences; 41,626,055 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 3e-15
seq113 86.0 5e-12
>seq1
Length=2331425
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 101264 AAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAAT 101323
|| |||||||| || || || ||||||||||| | | ||| | | || ||||||
Sbjct 481931 AAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAAT 481990
Query 101324 TGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATT 101383
||||| || ||||| || | ||||| || || || |||||||| || ||||| |||||
Sbjct 481991 TGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATC 482050
Query 101384 TTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCG 101443
|| || ||| | || | || || || | || ||||| | |||| ||| || ||
Sbjct 482051 TTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCC 482110
Query 101444 GTTAAAGTTTTTACAAATATCTGCAT 101469
|| ||||| || || || || |||||
Sbjct 482111 GTCAAAGTCTTCACGAAGATTTGCAT 482136
>seq113
Length=2004859
Score = 86.0 bits (94), Expect = 5e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || ||||| || || || || || ||||||| | ||| | | || || | ||
Sbjct 833607 ATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGCTG 833666
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || || || ||||||||||| || || || ||||| || || || || || || ||
Sbjct 833667 CTTGCCCGCGAAGATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTT 833726
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
| ||| || | || | ||||| |||| || || || || || | || || || ||
Sbjct 833727 TGCTTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCAGT 833786
Query 101446 TAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482
| || || ||||| |||||||| ||||||||
Sbjct 833787 GAGGGTCTTGACAAAGATCTGCATACCACCGCGAAGA 833823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396276757921380
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |