Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq286 217 3e-51 >seq286 Length=987428 Score = 217 bits (240), Expect = 3e-51 Identities = 387/560 (69%), Gaps = 11/560 (2%) Strand=Plus/Plus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | ||| |||||||| |||||| |||||||| ||||| |||||| | ||||| | Sbjct 832057 AGAGAAGGCATGCAAAGTCGGTGTGCATTCCTTCGTCGCGGCTAATGAGCTCATTGGAAA 832116 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 | || |||||||| | || | || || | |||||| || | |||||||||||| | Sbjct 832117 AAGTCAGGCCAGGCATCAAGCCTCGCTTCTTCATCCAGAAGATGGACGCGAAAGAGCCCG 832176 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAG-CGTTC 48301 ||||||||||||| || || || || ||||| | | || || |||| | | || Sbjct 832177 AGAAGAAGATGCCTTCAACAGCAGCAAACGCCACCAAGCGTTCACCAAAAGTTGACCGTC 832236 Query 48302 TTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCT 48361 ||| ||||||||| || |||||||||||||| ||||| || || || ||||| Sbjct 832237 -GGTCGGAGATCCAGTTCAGTGCCCAGTCTGCCTTGCGCTTGACACACGGAATGGTCTCC 832295 Query 48362 ATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGC 48418 | ||| ||| || | || || || | |||||| | |||||| |||| ||| Sbjct 832296 ACGGCGTCGAAAAGGTACTCGCGTTCGGCAGCGTCCTTGATATAGGTGTCGATGAGAAGC 832355 Query 48419 TTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTG 48478 | ||| |||| ||||| | ||||| || ||| ||||| || ||||| | Sbjct 832356 ---GAATACGTCTCTGAGTGAATGTTCTCCATCATGATTTGGAAGCCATAGAAACATCGA 832412 Query 48479 GCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCA 48538 ||||| || || || || |||| || | ||| | || ||||| ||||| || ||| Sbjct 832413 GCCTCGGCAACTTGGACCTCGTTGGAAAAGCGCTCGACAAGGTTCTCGTTGACAATACCA 832472 Query 48539 TCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGT---G 48595 || || || || ||||| || |||||||| | ||||||||||||||||| | | | Sbjct 832473 TCCGAGGCTGCGAAGAAAGCGAGGACATGGGAGATGAAATGGCGCTCGTTGTCGTTAAGG 832532 Query 48596 AGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGAC 48655 | | ||||| | || | ||||| ||||||| ||| || ||||||| || ||| Sbjct 832533 CGGGTTGTCCAGTCATGAATATCTTTCGAGAGGTCCATTTCCTCTGCAGTCCAAAACGAC 832592 Query 48656 GCGAGTGCTTTTTTGTACAT 48675 || || || |||||||| Sbjct 832593 GCCTCAGCCTTCTTGTACAT 832612 Score = 150 bits (166), Expect = 3e-31 Identities = 364/547 (67%), Gaps = 7/547 (1%) Strand=Plus/Minus Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 || || || || |||||||||| ||||| || || || ||| | ||||| || || Sbjct 834286 CATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAAAATGTCAGG 834227 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | || | | |||| |||||| |||| || || || ||||| ||||| Sbjct 834226 CCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCAGAAAAGAAT 834167 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || || ||||| || || || || || | || | || | | | |||||||| Sbjct 834166 ATCCCTTCCACAGCAGCAAAGGCAACTAGACGTTCCGCAAAGGTTGAATGTTTGTCTGAA 834107 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| || ||||| || || || ||||||||| || || || |||||||| | Sbjct 834106 ATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCTATGGCGTCG 834047 Query 48371 AAGAGCTTCTTGCACTCACCTGCG--TCCGCAACATAGGTAGTGAGCAGCTTTGCGTACA 48428 || || | || | | |||||| ||| | ||| | || ||| | ||| Sbjct 834046 AAAAGGTGG--GCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAAGCAACGAATACG 833989 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 | || || || | |||||| || ||| || || || ||||||| | ||||| | Sbjct 833988 TTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCGCCTCGGGTA 833929 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 |||||||||| | || || || | || ||||| || || || |||||||| || | Sbjct 833928 CCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCATCTGAGGCCG 833869 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGA--GCA-TTCC 48605 ||||||| ||||| ||||| | |||| ||||| | ||| ||||| | | |||| Sbjct 833868 CAAAGAAAGCAAGAACATGCGATATAAAATACCGCTCATCATGGTTGAGATTGAAGTTCC 833809 Query 48606 AGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTT 48665 || || | ||| | | ||||| | |||||| | |||||||| || || | |||| Sbjct 833808 AGTCCACGAAGTCATGGGAAAGGTCAAGTTCTTCAGCTGTCCAGAATGAGGCTTGAGCTT 833749 Query 48666 TTTTGTA 48672 | ||||| Sbjct 833748 TCTTGTA 833742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931528840985600