Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq286 149 1e-30 seq335 120 6e-22 >seq286 Length=987428 Score = 149 bits (164), Expect = 1e-30 Identities = 378/572 (66%), Gaps = 11/572 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||||||||||||| | || ||||| || || || || || || Sbjct 832621 ATCTGGCAAATGTACAAGAAGGCTGAGGCGTCGTTTTGGACTGCAGAGGAAATGGACCTC 832562 Query 25537 GCCAAGGACATGGACGGCTGG----TACGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 | || || || | | |||| ||| || | | | |||||| ||||| || Sbjct 832561 TCGAAAGATATTCATGACTGGACAACCCGCCTTAACGACA-ACGAGCGCCATTTCATCTC 832503 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 | || | || ||||| |||||||| |||||||| || |||||||| || |||| | Sbjct 832502 CCATGTCCTCGCTTTCTTCGCAGCCTCGGATGGTATTGTCAACGAGAACCTTGTCGAGCG 832443 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 || ||| || || || | ||||| |||||||| || ||||| || || Sbjct 832442 CTTTTCCAACGAGGTCCAAGTTGCCGAGGCTCGATGTTTCTATGGCTTCCAAATCATGAT 832383 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGT 25769 || || | ||||| ||| |||| | |||||| || || || || | |||| Sbjct 832382 GGAGAACATTCACTCAGAGACGTATTC---GCTTCTCATCGACACCTATATCAAGGACGC 832326 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 ||||| | || || || | ||| | ||| ||| || | ||||| | ||||| Sbjct 832325 TGCCGAACGCGAGTACCTTTTCGACGCCGTGGAGACCATTCCGTGTGTCAAGCGCAAGGC 832266 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 ||||| |||| |||||| | || | | || ||||| || || |||| || Sbjct 832265 AGACTGGGCACTGAACTGGATCTCCGACCGACGGTCAACTTTTGGTGAACGCTTGGTGGC 832206 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 ||||||||||| || |||||||| ||| || || || ||| ||||||||||| | || Sbjct 832205 GTTTGCTGCTGTTGAAGGCATCTTCTTCTCGGGCTCTTTCGCGTCCATCTTCTGGATGAA 832146 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || || ||||| || ||| |||||||| |||||||| ||| | ||||| || Sbjct 832145 GAAGCGAGGCTTGATGCCTGGCCTGACTTTTTCCAATGAGCTCATTAGCCGCGACGAAGG 832086 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 | |||| || ||||| ||||| |||| || Sbjct 832085 AATGCACACCGACTTTGCATGCCTTCTCTTCA 832054 Score = 120 bits (132), Expect = 6e-22 Identities = 375/566 (66%), Gaps = 15/566 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | | |||||||| |||||| |||| |||||| || ||||| |||| || Sbjct 833730 ATATGGCAATTCTACAAGAAAGCTCAAGCCTCATTCTGGACAGCTGAAGAACTTGACCTT 833789 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAA----GACGAGCAGCATTTTCTCAA 25592 || | ||| | | | |||| || || ||| || || |||| | ||||| | Sbjct 833790 TCCCATGACTTCGTGGACTGGAACT-TCAATCTCAACCATGATGAGCGGTATTTTATATC 833848 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 | | || | || |||||||| ||||| ||||| || || |||||||| || ||| || Sbjct 833849 GCATGTTCTTGCTTTCTTTGCGGCCTCAGATGGCATTGTAAACGAGAACCTCGTCGAAAG 833908 Query 25653 ATTCACCAGGGAAGTGCAG-TACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711 || | ||||||||| ||| | |||| | ||||| || || || || | Sbjct 833909 GTTTTGTGGTGAAGTGCAGGTACCCG-AGGCGCGTTCCTTCTATGGCTTTCAAATCATGA 833967 Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCT-GATGACGTACATTACAGACGTC 25770 | || ||| | || || || |||| | |||| | |||| | ||||| | || | Sbjct 833968 TGGAGAATATCCATTCCGAAACGTATTCGTTGCTTATCGATGGC-TACATCAAGGATC-C 834025 Query 25771 GCCG-AGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 || | || | | | || || | ||||| || ||| || |||||||| | || || Sbjct 834026 GCAGGAGCGGGCCCACCTTTTCGACGCCATAGACACCATTCCTTGCATCAAGCGCAAAGC 834085 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTAG 25888 ||||| | || ||||| ||| || | | || |||| || || || || | Sbjct 834086 TGATTGGGCTCTAAAATGGATTT-CAGACAAACATTCAACCTTTGCGGAACGTCTAGTTG 834144 Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948 |||||||||||||||| || || || || || |||||||| | || |||||| ||| Sbjct 834145 CCTTTGCTGCTGTGGAAGGGATATTCTTTTCTGGGTCGTTTGCCTCAATATTCTGGATCA 834204 Query 25949 AGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 || | | | || | ||||| || ||| |||||||| ||||| || || | |||||| Sbjct 834205 AG-AAACGTGGTCTTATGCCTGGCCTGACATTTTCCAATGAGCTTATTAGTCGAGACGAG 834263 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCT 26033 || | |||| ||||| || || || Sbjct 834264 GGCTTGCACACCGATTTCGCATGTCT 834289 >seq335 Length=51571 Score = 120 bits (132), Expect = 6e-22 Identities = 316/472 (67%), Gaps = 8/472 (2%) Strand=Plus/Plus Query 25563 TCTATCCAAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGA 25622 |||||| || || || ||||||| | ||||| ||||||||||||| ||||| || Sbjct 19550 TCTATCAAACGATGACAGGCATTTTTTGTCACACGTGCTGGCATTCTTTGCTGCCTCCGA 19609 Query 25623 TGGTATAGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTGCAGTACGT-GGAGG 25681 || || || ||||| ||||| | || | || | | | || | || | | ||||| Sbjct 19610 CGGCATCGTCAACGAAAATCTTTTGGAACGGTTTTCTCGAG-AGATCGGTCCATGGGAGG 19668 Query 25682 CCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCA 25741 || | ||| |||||||| |||| ||||| ||||| ||||| || | ||| || Sbjct 19669 CCCGTTCTTTTTACGGTTTTCAGACAATGATCGAGAATGTTCACTCCGAAGCATATTCCT 19728 Query 25742 AGCTTCT-GATGACGTACATTACAGACGTCGCCGAGAGAGATC-GGCTGTTTGGTGCCAT 25799 | | | ||| || || ||| ||| |||||| | || | ||||| ||||| Sbjct 19729 TGTTGATAGAT-ACCTATATTCGGGACAGCGCCGA-ACGGACCTATCTGTTCAACGCCAT 19786 Query 25800 CGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA 25859 |||| ||| || | || |||||| || | || || | || ||||| ||| | Sbjct 19787 CGAGACCATTCCTTGTATTCGGAGGAAAGCAGGCTGTGCATTAAAATGGATTAACGATCC 19846 Query 25860 GAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAG 25919 || | | ||| |||||| |||| ||||| ||| ||| || ||||| || ||| Sbjct 19847 GACCCGCATTTTTCCCGAGCGCTTGGTGGCCTTCGCTTGTGTCGAAGGCATTTTCTTCTC 19906 Query 25920 CGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTT 25979 ||| |||||||| || ||| ||| ||||| | |||| ||||| || || |||| Sbjct 19907 CGGATCGTTTGCAGCGGTCTATTGGATCAAGAAACGGGGGCTTATGCCAGGTTTG-ACTT 19965 Query 25980 T-TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTG 26030 | || ||||| || |||||||| || || || || || | || || ||||| Sbjct 19966 TCTCGAACGAACTAATCAGCAGAGATGAAGGGCTTCATACCGACTTCGCCTG 20017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928840852409600