Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31]
340 sequences; 41,626,055 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 4e-17
seq113 93.3 3e-13
>seq1
Length=2331425
Score = 105 bits (116), Expect = 4e-17
Identities = 115/153 (75%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676
||| ||||| ||||| || |||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 482209 ATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTT 482268
Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAAT 480736
|||||| || || ||||| || |||||||| | | | ||| ||||| ||
Sbjct 482269 GTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGAT 482328
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || || ||||| || ||||| || ||
Sbjct 482329 GGTCTTGCCTGTCAGAGTTTTGACGAAGATCTG 482361
>seq113
Length=2004859
Score = 93.3 bits (102), Expect = 3e-13
Identities = 114/153 (75%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677
|| || || ||||| ||||||||||| | || ||||| ||||| || || || ||||||
Sbjct 833373 TCCTCGAGCTGCTTCCCAGCAAAAATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTG 833432
Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736
|| |||||||| |||||| || ||||| || | || | | || ||||||||
Sbjct 833433 TCCTGAATCTTCGCCTTGACATTGTCGATAGTGTCCGATGATTCGA-CCTCGAGGGTAAT 833491
Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|| || || ||||| ||||| |||||||||||
Sbjct 833492 GGTCTTTCCCGTGAGCGTCTTGACGAAAATTTG 833524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268164615750320
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |