Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31]
340 sequences; 41,626,055 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq286 91.5 3e-13
seq2 89.7 9e-13
>seq286
Length=987428
Score = 91.5 bits (100), Expect = 3e-13
Identities = 164/240 (68%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 39122 TAAACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGT 39181
|| |||||| ||||| || || || || ||||| | | |||| ||||| ||| ||
Sbjct 834290 TAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAAAATGT 834231
Query 39182 TAATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAA 39241
| || ||||| | || | || || | ||| |||||||| ||||| | ||||||
Sbjct 834230 CAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCAGAAAA 834171
Query 39242 GAATATACCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATC 39301
|||||| || |||||| ||||| || | || | | | |||| || | | | ||
Sbjct 834170 GAATATCCCTTCCACAGCAGCAAAGGCAACTAGACGTTCCGCAAAGGTTGAATGTTTGTC 834111
Query 39302 TAAAATCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGC 39361
| ||||||| |||| |||||||| ||||| ||||| |||| || | ||||| ||
Sbjct 834110 TGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCTATGGC 834051
>seq2
Length=2111947
Score = 89.7 bits (98), Expect = 9e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 39125 ACATGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAA 39184
||| |||||||||||||| || || ||||| ||| || | ||||| ||| |||||
Sbjct 203935 ACAAGCAAAATCCGTATGCAAGCCCTCGTCTCTACTGATGAGCTCATTGGAAAATGTTAA 203994
Query 39185 TCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAA 39244
|| ||||| || || | || || | ||||||||| | || ||| || |||||| ||
Sbjct 203995 ACCGGGCATCAAGCCACGTTTCTTCAACCAAAATATGGCCGCGAAAGAACCAGAAAAAAA 204054
Query 39245 TATACCCTCCACACACGCAAATGC 39268
||| || || ||||| ||||| ||
Sbjct 204055 TATGCCTTCGACACAGGCAAACGC 204078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905132153172000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |