Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq286 116 1e-20 >seq286 Length=987428 Score = 116 bits (128), Expect = 1e-20 Identities = 255/379 (67%), Gaps = 6/379 (2%) Strand=Plus/Plus Query 133281 GGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGA 133340 ||||| || ||||| || | |||| || ||| |||| ||||| | || || || Sbjct 833908 GGTTTTGTGGTGAAGTGCAGGTACCCGAGGCGCGTTCCTTCTATGGCTTTCAAATCATGA 833967 Query 133341 TGGAAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCG 133400 |||| ||||||||||| || ||||| || || ||| |||||||| ||| ||| Sbjct 833968 TGGAGAATATCCATTCCGAAACGTATTCGTTGCTTATCGATGGCTACATCAAGGAT-CCG 834026 Query 133401 TCCAGAAGC---ACAAACTATTCAACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAAT 133457 ||| ||| | | || ||| ||||||| | ||||||| || || ||| Sbjct 834027 --CAGGAGCGGGCCCACCTTTTCGACGCCATAGACACCATTCCTTGCATCAAGCGCAAAG 834084 Query 133458 CTGACTGGGCTATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTG 133517 |||| |||||| | |||||||| ||||| | | | | ||||| ||||| |||| Sbjct 834085 CTGATTGGGCTCTAAAATGGATTTCAGACAAACATTCAACCTTTGCGGAACGTCTAGTTG 834144 Query 133518 CTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTA 133577 | ||||||| || || || || || || ||| |||| ||| || || ||| | | Sbjct 834145 CCTTTGCTGCTGTGGAAGGGATATTCTTTTCTGGGTCGTTTGCCTCAATATTCTGGATCA 834204 Query 133578 AAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGG 133637 | || |||||| || | ||||| ||| ||||| || || |||||| | ||||||| Sbjct 834205 AGAAACGTGGTCTTATGCCTGGCCTGACATTTTCCAATGAGCTTATTAGTCGAGACGAGG 834264 Query 133638 CACTTCACACCGAATTTGC 133656 | |||||||| || || Sbjct 834265 GCTTGCACACCGATTTCGC 834283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471811188394580