Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq286 158 2e-32 seq308 87.8 3e-11 >seq286 Length=987428 Score = 158 bits (174), Expect = 2e-32 Identities = 233/327 (71%), Gaps = 5/327 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||||||||| || || | || ||| ||| ||||| ||||| | ||| |||||| Sbjct 832086 CCTTCGTCGCGGCTAATGAGCTCATTGGAAAAAGTCAGGCCAGGCATCAAGCCTCGCTTC 832145 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || | ||| ||||||| |||| ||||||||| |||||||| || || || ||||| Sbjct 832146 TTCATCCAGAAGATGGACGCGAAAGAGCCCGAGAAGAAGATGCCTTCAACAGCAGCAAAC 832205 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | || | || || ||||||| | | | || | |||||| |||| ||||| Sbjct 832206 GCCACCAAGCGTTCACCAAAAGTTGACCGTCGGTC---GGAGATCCAGTTCAGTGCCCAG 832262 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCG-CGAAAGAGGTGGTCCTTCTC 794579 |||||||| | | || | || | || || | |||| ||||| |||| || || Sbjct 832263 TCTGCCTTGCGCTTGACACACGGAATGGTCTCCACGGCGTCGAAA-AGGTACTCGCGTTC 832321 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 | | | |||||||| |||||||||||||| ||||| || ||||||||||| ||||| || Sbjct 832322 GGCAGCGTCCTTGATATAGGTGTCGATGAGAAGCGAATACGTCTCTGAGTGAATGTTCTC 832381 Query 794640 GATGGCGATCTGGAAGCCATAAAAGCA 794666 || ||| ||||||||||| || || Sbjct 832382 CATCATGATTTGGAAGCCATAGAAACA 832408 Score = 95.1 bits (104), Expect = 2e-13 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 793896 CCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAG 793955 |||||||| | || || |||||| |||||| ||||| |||||||||| || ||| Sbjct 831713 CCCGCCTTCGAGTAGTCTGAGACGCGCTTCTCGAAGAAGTTTGTCTTGCCCTGCAGTGAG 831772 Query 793956 ATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGAC 794015 |||| ||||| | ||| ||||| | || || ||| || ||||| | Sbjct 831773 ATCATGTCCATGAAGTCGAATGGGTTTGTCGAGTTATACAACTTGTCATTTCCGAGGGCA 831832 Query 794016 GCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCG 794075 | || || |||||||| || ||||||||||| || ||||| | | | || |||||||| Sbjct 831833 ACGAGGAGACGGTCGGCAACAAATTCAATGTATTGACACATCAAGTCAGCATTCATGCCA 831892 Query 794076 ATGAGCGCCACGGGCAG 794092 |||||| ||| ||||| Sbjct 831893 ATGAGCTTCACTGGCAG 831909 >seq308 Length=957167 Score = 87.8 bits (96), Expect = 3e-11 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2070133 AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGC 2070192 || ||||||||||| |||||||| |||| || || || || ||||||| ||| || || Sbjct 618340 AAGGCGTCGGCCAGACCCTGCACACCGATTCCGATGGGTCGATGGCGCATGTTTGACCGC 618399 Query 2070193 CGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTG 2070243 || |||||||| || || |||| ||||| ||| || || || || || ||| Sbjct 618400 CGAGCCTCGGGAACAGGATAGTAGTTGACGTCAATGACTCGATTCAGATTG 618450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916210232649260