Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq286 84.2 2e-11 seq1 82.4 7e-11 >seq286 Length=987428 Score = 84.2 bits (92), Expect = 2e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 50274 ACTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGC 50333 ||||| | ||||| || ||||||||||| |||||||| | || || || || Sbjct 832228 ACTTTTGGTGAACGCTTGGTGGCGTTTGCTGCTGTTGAAGGCATCTTCTTCTCGGGCTCT 832169 Query 50334 TTTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAAC 50393 || || |||| || | || || | |||| | ||||| ||||| || ||| ||| Sbjct 832168 TTCGCGTCCATCTTCTGGATGAAGAAGCGAGGCTTGATGCCTGGCCTGACTTTTTCCAAT 832109 Query 50394 GAGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTG 50437 ||| | ||| |||||||||||||||||||| |||||||| || Sbjct 832108 GAGCTCATTAGCCGCGACGAAGGAATGCACACCGACTTTGCATG 832065 >seq1 Length=2331425 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || || || || ||||||||||| | || | ||| |||||||| || || Sbjct 482396 GTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGGCCGTCCTCGAGTTGCTTGCCG 482455 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 || | || || || |||||||||||||| ||||| || || || ||| ||| || Sbjct 482456 GCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCTGAATCTTTGCCTTG 482515 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||| | | || ||||| | || | |||||||||||||||||| Sbjct 482516 ACATTGTCGATGGTGTCGGAAGACTCGACTTCCAGCGTGATCGTCTTGCCGGTCAATGTC 482575 Query 137395 TTTACGAATATTTGCATA 137412 || || || || |||||| Sbjct 482576 TTCACAAAAATCTGCATA 482593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488541923688000