Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1 118 1e-21 seq113 116 4e-21 >seq1 Length=2331425 Score = 118 bits (130), Expect = 1e-21 Identities = 147/199 (74%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| || | ||| ||| | ||||| ||||||||||| Sbjct 482168 GTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGACCA-TCCTCAAGCTGCTTGCC 482226 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || ||||||| || || || || || || || ||||||||||| ||| || ||| Sbjct 482227 GGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTTGTCTTGGATTTTCGCCTT 482286 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || |||| || || || |||| ||||| ||| ||||| |||||||| Sbjct 482287 GACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGATGGTCTTGCCTGTCAGAGT 482346 Query 133643 TTTTACGAAAATCTGCATG 133661 ||| ||||| ||||||||| Sbjct 482347 TTTGACGAAGATCTGCATG 482365 Score = 114 bits (126), Expect = 1e-20 Identities = 146/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || |||||||| | || || || |||||||| ||||||| Sbjct 482396 GTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGGCCG--TCCTCGAGTTGCTTGC 482453 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| |||| || |||||||| |||||||| ||||| ||||| || |||||| || Sbjct 482454 CGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCTGAATCTTTGCCT 482513 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | ||||||| | ||| || || | |||| || |||||||||| | Sbjct 482514 TGACATTGTCGATGGTGTCGGAAGACTCGACTTCCAGCGTGATCGTCTTGCCGGTCAATG 482573 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || || ||||||||||| Sbjct 482574 TCTTCACAAAAATCTGCAT 482592 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | |||| ||| ||||| ||||||||||| || || | |||||| | Sbjct 481931 AAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAAT 481990 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || || | ||||| ||||||||||| ||||| ||||| ||||| || ||| Sbjct 481991 TGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATC 482050 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | |||| ||| || | | ||| || || | |||| || || || Sbjct 482051 TTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCC 482110 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||| || ||||| || ||||| Sbjct 482111 GTCAAAGTCTTCACGAAGATTTGCAT 482136 >seq113 Length=2004859 Score = 116 bits (128), Expect = 4e-21 Identities = 146/198 (74%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || |||||||| | ||| ||| | || || |||||||| || Sbjct 833897 GTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCA-TCTTCCAGCTGCTTTCC 833955 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | ||||| ||||| || ||||| || |||||||| |||||| ||| Sbjct 833956 GGCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTT 834015 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| || || | || ||| || || | ||||| ||| || || ||||| || Sbjct 834016 GACGTTGTCAATGGTATCCGAGGACTCGACTTCCAGGGTGATGGTCTTTCCCGTCAGTGT 834075 Query 133643 TTTTACGAAAATCTGCAT 133660 ||| |||||||||||||| Sbjct 834076 TTTGACGAAAATCTGCAT 834093 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || || |||||| | ||| | ||||||||||||||||||| Sbjct 833614 GTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGCTGCTTGCCC 833673 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | ||||||||||| || || || || |||||||| ||||||| ||| Sbjct 833674 GCGAAGATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTGCTTTG 833733 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||||| | ||| || |||| ||| | || || || || || || Sbjct 833734 ACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCAGTGAGGGTC 833793 Query 133644 TTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 833794 TTGACAAAGATCTGCAT 833810 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCCGCGTA 133528 ||| ||||| || ||||| || | ||| | ||||||||||||||| || || | Sbjct 833336 CTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGAGCTGCTTCCCAGCAAA 833395 Query 133529 AATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTG 133588 ||| | ||||| ||||| || ||||| || |||||||| ||||| ||||| | Sbjct 833396 AATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACATT 833455 Query 133589 CTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTAC 133648 || | ||||| | | || || |||| ||| | ||| || || || || || || || Sbjct 833456 GTCGATAGTGTCCGATGATTCGACCTCGAGGGTAATGGTCTTTCCCGTGAGCGTCTTGAC 833515 Query 133649 GAAAATCTGCAT 133660 |||||| ||||| Sbjct 833516 GAAAATTTGCAT 833527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418745461600