Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq113 100 7e-16 seq1 89.7 1e-12 >seq113 Length=2004859 Score = 100 bits (110), Expect = 7e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || |||||| || || ||||| || ||||| ||||||| || || || Sbjct 834090 CAGATTTTCGTCAAAACACTGACGGGAAAGACCATCACCCTGGAAGTCGAGTCCTCGGAT 834031 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || || || || || ||| || Sbjct 834030 ACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAACAG 833971 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||||||||||||| |||||||||| | ||| | | ||||||||| | Sbjct 833970 CGCTTGATCTTCGCCGGAAAGCAGCTGGAAGATGGTCGCACTCTTTCTGATTACAACATT 833911 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||| ||||| ||||||||||||| Sbjct 833910 CAGAAGGAGTCCACTCTTCACCTTG 833886 Score = 87.8 bits (96), Expect = 4e-12 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 204765 CAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCCA 204824 ||||||||||||| ||||| ||||| | || || |||| | ||| | |||||||||| Sbjct 833886 CAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCA 833945 Query 204825 GCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||||||||||||||||| | || ||||| Sbjct 833946 GCTGCTTTCCGGCGAAGATCAAGCGCTGTTG 833976 >seq1 Length=2331425 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||||||||| || ||||| ||||||| || ||||| | | ||| | ||||| || Sbjct 482612 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCCTCA 482671 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||||||||| ||||||||||| |||||||| Sbjct 482672 AGCTGCTTTCCAGCGAAGATAAGGCGTTGTTG 482703 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||||||||| || ||||| ||||| | |||||||||| | || | ||| || || Sbjct 482896 ACAAGGTGAAGGGTCGACTCCTTCTGAATGTTATAGTCAGATAGGGTTCGTCCGTCCTCG 482955 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||||||||||||||||||||| ||||| || Sbjct 482956 AGCTGCTTTCCGGCGAAGATAAGACGTTGCTG 482987 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 ||| | ||||||||||| ||||||||| | || ||||| | ||| | |||| |||||| Sbjct 482700 CAACGCCTTATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACTCTTTCCGACTACAAC 482641 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||||| ||||| || ||||||||||| Sbjct 482640 ATCCAGAAGGAGTCCACCCTTCACCTTGT 482612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181815651693140