Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31]
340 sequences; 41,626,055 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1 95.1 1e-14
seq113 87.8 2e-12
>seq1
Length=2331425
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
|||| ||| | ||||| || | | ||||| || || ||||||||||| | |||
Sbjct 482144 CGCAGGCGGAGAACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTG 482203
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| ||| || ||||| || |||| | | || ||||| |||||||| || || || |||
Sbjct 482204 CGACCATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCT 482263
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
|| || || ||||| || | | || | |||||||| | || |||||||
Sbjct 482264 TCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGG 482323
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
|| | || || || ||||||||||| | ||| |||||||||
Sbjct 482324 GTGATGGTCTTGCCTGTCAGAGTTTTGACGAAGATCTGCATG 482365
>seq113
Length=2004859
Score = 87.8 bits (96), Expect = 2e-12
Identities = 74/91 (81%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|||||||| |||||||||||||| | ||||||| |||||||||||| || |||| |
Sbjct 834128 GACTCTTTCTGAATGTTGTAGTCTGAGAGGGTACGCCCATCTTCGAGCTGCTTCCCGGCA 834187
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGC 132020
|||| ||||||||||| || || || ||||
Sbjct 834188 AAGATCAGACGCTGTTGGTCGGGCGGGATGC 834218
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476609174402400
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |