Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 seq113 87.8 2e-12 >seq1 Length=2331425 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| ||| | ||||| || | | ||||| || || ||||||||||| | ||| Sbjct 482144 CGCAGGCGGAGAACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTG 482203 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || ||| || ||||| || |||| | | || ||||| |||||||| || || || ||| Sbjct 482204 CGACCATCCTCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCT 482263 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || ||||| || | | || | |||||||| | || ||||||| Sbjct 482264 TCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGG 482323 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || | || || || ||||||||||| | ||| ||||||||| Sbjct 482324 GTGATGGTCTTGCCTGTCAGAGTTTTGACGAAGATCTGCATG 482365 >seq113 Length=2004859 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| |||||||||||||| | ||||||| |||||||||||| || |||| | Sbjct 834128 GACTCTTTCTGAATGTTGTAGTCTGAGAGGGTACGCCCATCTTCGAGCTGCTTCCCGGCA 834187 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGC 132020 |||| ||||||||||| || || || |||| Sbjct 834188 AAGATCAGACGCTGTTGGTCGGGCGGGATGC 834218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476609174402400