Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq286 214 3e-49 seq47 98.7 1e-14 >seq286 Length=987428 Score = 214 bits (236), Expect = 3e-49 Identities = 386/546 (71%), Gaps = 19/546 (3%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || ||||| ||||| || |||||||| || ||||| | |||| Sbjct 832622 GATCTGGCAAATGTAC-AAGAAGGCTGAGGCGTCGTTTTGGACTGCAGAGGAAATGGACC 832564 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891 || || | ||||| | | | | |||| ||||||||||||||||| Sbjct 832563 TCTCGAAAGATATTCATGACTGGACAACCCGCCTTAACGACAACGAGCGCCATTTCATCT 832504 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 || |||||||| ||| ||||| ||| ||||| || || ||||||||| | || Sbjct 832503 CCCATGTCCTCGC-TTTCTTCGCAGCCTCGGATGGTATTGTCAACGAGAACCTTGTCGAG 832445 Query 1455952 CGCTTTATGAAAGAGGTCCAA-TTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGC 1456010 |||||| || ||||||||| ||||| ||||| || | || || || ||||| ||| Sbjct 832444 CGCTTTTCCAACGAGGTCCAAGTTGCC-GAGGCTCGATGTTTCTATGGCTTCCAAATCAT 832386 Query 1456011 CATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070 || || ||||| ||||| || || || ||||| || ||||||||||| |||||||| | Sbjct 832385 GATGGAGAACATTCACTCAGAGACGTATTCGCTTCTCATCGACACCTATATCAAGGACGC 832326 Query 1456071 GGTCGAGAAGGACCACCTCTTTCG-CGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGG 1456129 | ||| || |||| ||||| |||| | || || | |||| || | | |||| Sbjct 832325 TGCCGAACGCGAGTACCT-TTTCGACGCCGTGGAGACCATTCCGTGTGTCAAGCGCAAGG 832267 Query 1456130 CCGACTGGGCGATGAAGTGGATCAAC-AAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 | |||||||| |||| |||||| | | || || || || |||| || || | | Sbjct 832266 CAGACTGGGCACTGAACTGGATCTCCGACCGACGG--TCAAC-TTTTGGTGAACGCTTGG 832210 Query 1456189 TCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGG 1456246 | | ||||| || || || |||||||| ||||||||| |||| ||| ||||||| ||| Sbjct 832209 TGGCGTTTGCTGCTGTTGAAGGCATCTTCTTCTCGGGCTCTTTC-GCGTCCATCTTCTGG 832151 Query 1456247 CTCAAGAAGCGCGGCCTCATGCCCGGTCT-TCTGCTTTAGCAACGAATTTATCAGTCGCG 1456305 | |||||||| ||| | ||||| || || || ||| ||| || | || || |||| Sbjct 832150 ATGAAGAAGCGAGGCTTGATGCCTGGCCTGACT--TTTTCCAATGAGCTCATTAGCCGCG 832093 Query 1456306 ACGAAG 1456311 |||||| Sbjct 832092 ACGAAG 832087 >seq47 Length=763068 Score = 98.7 bits (108), Expect = 1e-14 Identities = 114/151 (75%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 || ||||| || |||||||||| | ||||| ||||| || ||| ||||||||||||| Sbjct 169980 GCGGACCTCGTGTCGTGGGGCGCGATTGGTGCACGCACGACTGAGTCCCAGGTGCACCGC 169921 Query 165810 GAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGTG 165869 ||| | | || |||||| || |||||| ||||||||||| ||| || || || ||| Sbjct 169920 GAGCTCACATCTGCGCTGTCGATGCCCACGGGCTTCAAAAATTCCACGGATGGGAGTGTG 169861 Query 165870 GCGACGGCCCTCGATGCCGTG-CGCACTGCC 165899 | || || | |||| |||| ||| ||||| Sbjct 169860 GGGATCGCGATTGATG-CGTGCCGCGCTGCC 169831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177778406375080