Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1 136 4e-27 seq113 120 3e-22 >seq1 Length=2331425 Score = 136 bits (150), Expect = 4e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 35529 CCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCA 35588 |||| || | || |||||||| ||||| |||||||| | ||| || ||| |||| |||| Sbjct 481929 CCAAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCA 481988 Query 35589 GCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGA 35648 ||||| || ||||| || | ||||||||||| | ||||| || |||||| ||| | Sbjct 481989 ATTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAA 482048 Query 35649 TCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTAC 35708 |||| ||||| | | | | ||| || || || || |||| ||||||||| || | Sbjct 482049 TCTTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTC 482108 Query 35709 CCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||||||| ||||| || || ||||| Sbjct 482109 CCGTCAAAGTCTTCACGAAGATTTGCAT 482136 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | ||||| |||| || || ||||| || || || Sbjct 482401 CTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 482460 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | |||||||| || | ||||| || |||||| ||| |||||| ||| | | | Sbjct 482461 AATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCTGAATCTTTGCCTTGACATT 482520 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || || |||| ||||||||| || || ||||| || ||||| Sbjct 482521 GTCGATGGTGTCGGAAGACTCGACTTCCAGCGTGATCGTCTTGCCGGTCAATGTCTTCAC 482580 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 482581 AAAAATCTGCAT 482592 >seq113 Length=2004859 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||| ||||||| | || ||| |||| || |||||||| ||||| || Sbjct 833619 CTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAA 833678 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | |||| | |||||||||| |||| ||||||| || Sbjct 833679 GATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATC-TTTGCTTTGACGT 833737 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | |||||| ||| || ||||| | || || || || || || | || || | Sbjct 833738 TGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCAGTGAGGGTCTTGA 833797 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 833798 CAAAGATCTGCAT 833810 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | | || || | || ||||||||||| || || || Sbjct 833902 CTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCAGCTGCTTTCCGGCGAA 833961 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||| ||||| | || | | |||||||||| |||||| ||| | || Sbjct 833962 GATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGA-CGT 834020 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || || || |||| ||||| || || ||||||| ||||| | Sbjct 834021 TGTCAATGGTATCCGAGGACTCGACTTCCAGGGTGATGGTCTTTCCCGTCAGTGTTTTGA 834080 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 834081 CGAAAATCTGCAT 834093 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| ||||||||||| || | | || ||| |||| || |||||||| || Sbjct 833331 GTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGAGCTGCTTCCCA 833390 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| ||||| ||||| ||||| | || | | |||||||||| ||||| ||| Sbjct 833391 GCAAAAATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTG 833450 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | | ||||| ||||| ||||| | || || || || ||||| | || Sbjct 833451 ACATTGTCGATAGTGTCCGATGATTCGACCTCGAGGGTAATGGTCTTTCCCGTGAGCGTC 833510 Query 35720 TTCACAAATATCTGCAT 35736 || || || || ||||| Sbjct 833511 TTGACGAAAATTTGCAT 833527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791684127200