Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1 138 1e-27 seq113 129 6e-25 seq69 84.2 2e-11 >seq1 Length=2331425 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| ||||| || ||||| || ||||||||||| | |||| || || || Sbjct 482156 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGACCATCCTCA 482215 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| |||||||| | ||| || ||||| ||||| || ||||| || ||||| Sbjct 482216 AGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTTGTCTTGG 482275 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 ||||| ||||| ||| | || ||||| ||||| || ||||| || ||||| || Sbjct 482276 ATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGATGGTCTTG 482335 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | |||||| ||||| || ||||| Sbjct 482336 CCTGTCAGAGTTTTGACGAAGATCTGCAT 482364 Score = 125 bits (138), Expect = 7e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| ||||| || ||||| || |||||||| || || || | ||| ||| Sbjct 482384 ACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGGCCGTCCTCG 482443 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || ||||| || ||||| | |||||||||||||| || ||||| || || || ||| Sbjct 482444 AGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCCTGA 482503 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| ||||| ||| | |||||||| || || || || || || || || || Sbjct 482504 ATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCGACTTCCAGCGTGATCGTCTTG 482563 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || ||||| ||||| Sbjct 482564 CCGGTCAATGTCTTCACAAAAATCTGCAT 482592 >seq113 Length=2004859 Score = 129 bits (142), Expect = 6e-25 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || ||| ||||| |||||||||||||| || ||| | ||| |||||| Sbjct 833322 AGGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGAGC 833381 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || ||||||||||| ||||| || || || || || || || || || ||||| Sbjct 833382 TGCTTCCCAGCAAAAATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATC 833441 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| ||| | ||||| || ||||| || ||||| |||||||| || || Sbjct 833442 TTCGCCTTGACATTGTCGATAGTGTCCGATGATTCGACCTCGAGGGTAATGGTCTTTCCC 833501 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || |||||||||||||| Sbjct 833502 GTGAGCGTCTTGACGAAAATTTGCAT 833527 Score = 123 bits (136), Expect = 3e-23 Identities = 152/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 |||| || || || || ||||| |||||||| || ||| || ||| | ||| |||| Sbjct 833603 CGAGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGA 833662 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 |||| ||||| || || |||||||||||||| || || || || || || || || || | Sbjct 833663 GCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGA 833722 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 | ||| |||||| ||| | ||||||||||| || || ||||| ||||| || || | Sbjct 833723 TCTTTGCTTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCC 833782 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | || || || || || ||||| Sbjct 833783 CAGTGAGGGTCTTGACAAAGATCTGCAT 833810 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || ||||| ||||| ||||||||||| || || ||| || || || ||| Sbjct 833888 AGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCAGC 833947 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || || || ||||| ||||| || || || || || || || || || || || Sbjct 833948 TGCTTTCCGGCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATC 834007 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || ||||| ||| | || || || || || || || || || ||||| || || Sbjct 834008 TTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACTTCCAGGGTGATGGTCTTTCCC 834067 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||| |||||||| ||||| Sbjct 834068 GTCAGTGTTTTGACGAAAATCTGCAT 834093 >seq69 Length=731732 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| |||||||| ||||||||||||| | |||| || || || ||||| Sbjct 268749 GTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCATCCTCCAGCTG 268808 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTAT 134608 ||||| || || |||| ||||||||| ||||| || || Sbjct 268809 CTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGGGAT 268847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396252056800