Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq3 105 1e-17 >seq3 Length=892390 Score = 105 bits (116), Expect = 1e-17 Identities = 247/369 (67%), Gaps = 4/369 (1%) Strand=Plus/Minus Query 161174 GAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAACCTGAATAT 161233 |||||||||||||| || || ||| || || ||||| |||||||| | ||||| Sbjct 627401 GAGATCTACAACCTCGGTGCTCAGTCGCACGTCAAAGTCTCTTTCGAAATGGCCGAATAC 627342 Query 161234 ACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTAGGT 161293 || | | | ||| | ||||| ||||| | | | || || || ||| ||| | Sbjct 627341 ACTGGAGACGTTGACGGCCTGGGCACCCTGCGCTTGCTCGACGCTGTCCGTA-CCTGCGG 627283 Query 161294 A--TGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTAC 161351 | ||| | | | || ||||||| || ||||| ||| | || || ||| Sbjct 627282 ACTTGAAAAGCACGTCAAGT-TCTACCAAGCGTCCACATCCGAGCTTTACGGCAAGGTCG 627224 Query 161352 AAGAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTA 161411 ||||||||||||| || || || || |||||||| || ||||| |||||| || | Sbjct 627223 TCGAGACACCACAGAGCGAGACGACGCCCTTCTACCCGCGCTCTCCCTATGGCTGCGCCA 627164 Query 161412 AACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTA 161471 | ||||||| || ||||| || |||||| | ||| ||||| ||| ||| | | Sbjct 627163 AGCTCTATGCCTACTGGATCGTCGTCAACTACCGCGAGGCCTATGGCATGTTCGCGTGCA 627104 Query 161472 GTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGA 161531 ||| || || |||||||| ||| || || ||||| ||| ||||| || | |||| Sbjct 627103 ATGGGATCCTGTTCAACCACGAGAGTCCCCGCCGGGGCCGGACATTCGTGACGAGGAAGA 627044 Query 161532 TTACTAGGG 161540 | || |||| Sbjct 627043 TAACGAGGG 627035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729926497799200