Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq286 152 7e-32 seq2 140 4e-28 seq335 109 8e-19 seq308 96.9 5e-15 >seq286 Length=987428 Score = 152 bits (168), Expect = 7e-32 Identities = 375/566 (66%), Gaps = 6/566 (1%) Strand=Plus/Minus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| || || ||||| || || | |||||| |||| |||||| | || || ||| Sbjct 834295 AACAATAGACATGCGAAATCGGTGTGCAAGCCCTCGTCTCGACTAATAAGCTCATTGGAA 834236 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 ||||| || |||||||| |||||||| || |||| ||| ||||| | ||||| || ||| Sbjct 834235 AATGTCAGGCCAGGCATAAGACCACGTTTCTTGATCCAGAATATTGAGGCAAACGACCCA 834176 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCA 39787 |||||||| || ||||| || || ||||| ||||| || | || | | ||| || Sbjct 834175 GAAAAGAATATCCCTTCCACAGCAGCAAAGGCAACTAGACGTTCCGCAAAGGTTGAATGT 834116 Query 39788 TTATGT---ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 || | | ||||| || | |||||||||||||| ||| | ||||| || || ||| Sbjct 834115 TTGTCTGAAATCCATTTTAGAGCCCAATCAGCTTTGCGCTTGATGCAAGGAATGGTGTCT 834056 Query 39845 ATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGA 39904 || || | || || | || | ||| || | || ||| || | || Sbjct 834055 ATGGCGTCGAAAAGGTGGGCCCGCTCCTGCGGATCCTTGATGTAGCCATCGATAAGCAAC 833996 Query 39905 CTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCT 39964 |||| |||| |||||||| || || ||| || ||||| || || || | | || Sbjct 833995 GAATACGTTTCGGAATGGATATTCTCCATCATGATTTGAAAGCCATAGAAGGAACGCGCC 833936 Query 39965 TCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCA 40024 || | | || || || |||||| ||||| | | || || || || || ||||| Sbjct 833935 TCGGGTACCTGCACTTCACCACAAAACCTTTCGACGAGGTTCTCGTTTACAATGCCATCT 833876 Query 40025 CTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATC-GGGTGTCAATTT 40083 || ||||| || || | ||||| |||||||| ||||| ||| ||| Sbjct 833875 GAGGCCGCAAAGAAAGCAAGAACATGCGATATAAAATACCGCTCATCATGGTTGAGATTG 833816 Query 40084 A--TTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCC 40141 | |||||||| || || | || | || | ||||||||||||||| || || || Sbjct 833815 AAGTTCCAGTCCACGAAGTCATGGGAAAGGTCAAGTTCTTCAGCTGTCCAGAATGAGGCT 833756 Query 40142 TCTGCCTTTTTGTACATGTTCCATAT 40167 | || || ||||| | | |||||| Sbjct 833755 TGAGCTTTCTTGTAGAATTGCCATAT 833730 >seq2 Length=2111947 Score = 140 bits (154), Expect = 4e-28 Identities = 282/415 (68%), Gaps = 5/415 (1%) Strand=Plus/Plus Query 39631 ATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACC 39690 ||| | |||||| |||||||| || | || || |||||||| | || ||||| | || Sbjct 203950 ATGCAAGCCCTCGTCTCTACTGATGAGCTCATTGGAAAATGTTAAACCGGGCATCAAGCC 204009 Query 39691 ACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGC 39750 ||| || || | |||||||||||| || ||||| |||||||| || |||||||| || Sbjct 204010 ACGTTTCTTCAACCAAAATATGGCCGCGAAAGAACCAGAAAAAAATATGCCTTCGACACA 204069 Query 39751 TGCAAATGCAACAAGTC-TCTCTC---CGTAACTTGTATCATTATGTATCCACTTCTGTG 39806 ||||| || || || | ||| | || ||| || || | | ||| | || Sbjct 204070 GGCAAACGCCACGAGGCGACTCCCGAACGAAAC-GGTGGAATCTTCGACCCATCGCAATG 204128 Query 39807 CCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAATGTT 39866 ||||||| || || || || | || || |||||| | || |||||||||| || Sbjct 204129 CCCAATCCGCCTTTTTTTTAATGCAGTCCACTGTTTCAAGCGCGTTAAAGAGATGGGCTT 204188 Query 39867 TTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGT 39926 ||| | |||||||| || || || || | || | ||| |||||||||| | || Sbjct 204189 GTTCTCGGGTGTCTTTAACGTAGGTGTCGATGAGCAAAGAATATGTTTCTGAATGAACGT 204248 Query 39927 TTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAAC 39986 |||| ||| ||||| || ||||| || | | || || | | ||||| || Sbjct 204249 TTTCGATCATGATCTGGAAACCGTAGAAGGAGCGCGCCTCCAGAGGTCCAACCTCGCAAG 204308 Query 39987 AAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGC 40041 |||| ||| | | |||||| ||||| || |||||| ||||||||||| || Sbjct 204309 AAAAGTTTTGAACGAGATTTTCGTTCACGATGCCATCAGACGCGGCAAAAAAGGC 204363 >seq335 Length=51571 Score = 109 bits (120), Expect = 8e-19 Identities = 372/575 (65%), Gaps = 30/575 (5%) Strand=Plus/Minus Query 39608 AACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAA 39667 |||| ||| ||||||||||| ||| || || |||||||| || |||| |||||| || Sbjct 20026 AACAATAAACAGGCGAAGTCGGTATGAAGCCCTTCATCTCTGCTGATTAGTTCGTTCGAG 19967 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || || | || ||||| || || || || |||| |||| | | || ||||| ||||| Sbjct 19966 AAAGTCAAACCTGGCATAAGCCCCCGTTTCTTGATCCAATAGACCGCTGCAAACGATCCG 19907 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATG-CAACAAGTCTCTCTCCGTAA-------- 39778 || ||||| |||||||| || || || | || |||| | ||| | || Sbjct 19906 GAGAAGAAAATGCCTTCGACACAAGCGAAGGCCACCAAG---CGCTCGGGAAAAATGCGG 19850 Query 39779 CTTGTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATT 39838 | | ||| ||| ||||| || ||| || | |||||| || | |||||| || Sbjct 19849 GTCGGATCGTTA---ATCCATTTTAATGCACAGCCTGCTTTCCTCCGAATACAAGGAATG 19793 Query 39839 GTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATT 39898 || || || || || || ||||| ||| | || || || ||| |||||||| Sbjct 19792 GTCTCGATGGCGTTGAACAGATAGGTCCGTTCGGCGCTGTCCCGAATATAGGTATCTATC 19733 Query 39899 AACA--GACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAAC 39956 |||| || ||| | ||| || || | || || ||| ||||||| ||||||||| Sbjct 19732 AACAAGGAATATGC--TTCGGAGTGAACATTCTCGATCATTGTCTGAAAACCGTAAAAAG 19675 Query 39957 ATCTTGCTTCAGTAATTTGTAC----CTCTGAACAAAATCTTTCCGCCAAATTTTCATTC 40012 | | || || || || |||| | |||| | |||| | |||||| || Sbjct 19674 AACGGGCCTC----CCATGGACCGATCTCTCGAGAAAACCGTTCCAAAAGATTTTCGTTG 19619 Query 40013 ACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG 40072 || || || || || ||||| ||||||| || ||| | ||||| | |||||| Sbjct 19618 ACGATGCCGTCGGAGGCAGCAAAGAATGCCAGCACGTGTGACAAAAAATGCCTGTCATCG 19559 Query 40073 GGTGTCA---ATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTC 40129 || | || | ||| || | ||| | ||| | ||| ||| | ||| Sbjct 19558 TTTGATAGACGTTGGTCCCAATCCGCCAAATCGGAACGAAGATCAAGTTCGTCAACGGTC 19499 Query 40130 CAAAACGACGCCTCTGCCTTTTTGTACATGTTCCA 40164 |||||||||| ||| || || || ||||| | ||| Sbjct 19498 CAAAACGACGACTCCGCTTTCTTATACATCTGCCA 19464 >seq308 Length=957167 Score = 96.9 bits (106), Expect = 5e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 69607 AATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCT 69666 || || || || ||||| || || ||||||||||| | ||| |||||| || || Sbjct 618962 AAAAGGTCAGGGATCCACAGCGCGTAGAAGAGATCTCTTGCCCTAGCTTCTTCCTTGCCA 619021 Query 69667 GTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATC 69726 ||| || | |||||| || || | | ||||| |||||| ||||| | || ||| Sbjct 619022 TGATTCTTCCGTAAATCGAGGAAATCAAACACATCAGCATGCCAGGGTTCGATGTAGATC 619081 Query 69727 GCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAG 69786 || | |||| ||||| || |||||||| ||||| | ||| | || ||| || ||| Sbjct 619082 GCGAATGCTCCTGGTCGCTTGTTTCCTCCTTGATCGACGTAGCGAGCGGTGGCATCATAA 619141 Query 69787 ACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATA 69839 | | ||||| || | || ||||| || | |||||| || |||| ||| || Sbjct 619142 GCACGAAGCATTGGCACTATGCCATTTGAATAACCATTGGTCCCAGCAATGTA 619194 Score = 84.2 bits (92), Expect = 3e-11 Identities = 207/314 (66%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 ||||| |||||||| ||| |||| ||| | ||||||| |||||| || || || ||| Sbjct 619278 AGACCAATTCCTCCAGCCGTTTTGCTGATCATGGCACAACTTTTCAAGGTATCGTAAATA 619337 Query 69931 CCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATA 69990 ||||| || |||||| ||||| | ||| || ||| | || ||| | Sbjct 619338 CCCTCAATCGAGTCATCTTTCATGCAGACAAGGAAGCAGGAGCTGAGCTGGGGATTGGGA 619397 Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 ||||| ||||| || | ||| || ||||| || ||||| ||||| | ||| ||| Sbjct 619398 GTTCCGGCATTGAAAAGTGTCGGCGATGCATGCGTGAAGTGACGCTCAGACATCAGGTTG 619457 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAAC 70110 || || || || | |||||||| | |||||| || | ||||| ||||| | | Sbjct 619458 TACGTCTCGATCACACGATCTATATCAGAGCCATGAATACCAACGGCGACTCGCATAATC 619517 Query 70111 ATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGA 70170 || || || || || || | | | ||| || | ||||| || |||||| Sbjct 619518 ATGTGTTGTGGCCGCTCAGCGACTCGACCATTGATACGGAGAAGGTAGGAACGCTCCAGA 619577 Query 70171 GTTTTAAACCCAAA 70184 ||||| || ||||| Sbjct 619578 GTTTTGAATCCAAA 619591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686905880637600