Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 2e-12 >seq1 Length=2331425 Score = 87.8 bits (96), Expect = 2e-12 Identities = 273/413 (66%), Gaps = 15/413 (4%) Strand=Plus/Minus Query 14063 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 14122 |||||||| || |||||||| | ||| ||| || |||| ||| ||| ||||| | Sbjct 1187459 CGATCAAACCGCCCTGGGCGCAAGAGTGCGGGATCTAGGACGTCAGGGCGATTCGTTCCG 1187400 Query 14123 GCGATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGAT 14180 || | ||||| | || | | | ||| ||||||||||||| || ||| || |||| Sbjct 1187399 GCCAACACAACAACATGTTCCTGT-GTTC-CAAAGCCATCCATTTCCACCAAAAGCTGAT 1187342 Query 14181 TGATGGTTTGTTCGCGTTCATCATTCGCAGGCA---TACCACCCGCACTGCGTTGCTTAC 14237 ||| ||| || | |||||||| || | | || ||| ||| ||| | Sbjct 1187341 TGAGGGTGGACTCCCTCTCATCATTGCCACCGAAGTTTCCCCCCTTTGCGCGAGACTTCC 1187282 Query 14238 CGACGGCGTCAATTTCATCGATGAAAACGATACATGG-TTGATTTTCACGGGCAACTTCA 14296 | | || || ||||| ||||| |||| ||| ||||| | |||| || | | || Sbjct 1187281 CAATAGCATCGATTTCGTCGATAAAAATGATGCATGGAGCGTGTTTCTTGGCCGA-AGCA 1187223 Query 14297 AAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCG 14356 |||| ||| || ||||| | || || || ||||||||||| || || | | | | Sbjct 1187222 AAGAGATCACGGACTCTTGAAGACCCAACTCCAACAAACATCTCGACGAACTCAGAGCCA 1187163 Query 14357 GA-ACATTGG--ATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 14413 || || || | ||| || ||| | ||| || || | || |||||||| || Sbjct 1187162 GATAC---GGACAGGAATGGCACGGAGGCTTCGCCAGCAGTTGCCTTCGCGAGGAGAGTT 1187106 Query 14414 TTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACC 14466 || ||||| || ||| || | ||||| ||| ||||| |||||| ||||||| Sbjct 1187105 TTACCCGTGCCCGGTGGTCCAGAGAGAATGGCGCCACGAGGGATCTTGGCACC 1187053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618432571650400