Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq113 178 3e-39 seq1 158 3e-33 seq69 98.7 2e-15 seq284 95.1 3e-14 >seq113 Length=2004859 Score = 178 bits (196), Expect = 3e-39 Identities = 164/208 (79%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||||||||||||||| || || ||||| ||||| | ||| || | |||||||||| Sbjct 833886 CAAGGTGAAGAGTGGACTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGACCATCTTCCA 833945 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||| || |||||||| | ||| ||||||||||| || | || ||||||||||||| Sbjct 833946 GCTGCTTTCCGGCGAAGATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGA 834005 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || ||||| || ||||| || ||| || || || || ||||| ||||||| Sbjct 834006 TCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACTTCCAGGGTGATGGTCTTTC 834065 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||| || || || || || | |||||| Sbjct 834066 CCGTCAGTGTTTTGACGAAAATCTGCAT 834093 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 || || ||||| ||||| || || ||||||||||| | ||| || | || || || ||| Sbjct 833605 AGATGCAGAGTAGACTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGC 833664 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 |||||||| |||||||| | || || |||||||| |||| || ||||||||||||||| Sbjct 833665 TGCTTGCCCGCGAAGATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATC 833724 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 ||| ||| ||||| ||||||||||| || || |||||||| || || ||||| || Sbjct 833725 TTTGCTTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCA 833784 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| ||||| | |||||| Sbjct 833785 GTGAGGGTCTTGACAAAGATCTGCAT 833810 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 |||||||||||| ||| || || ||||| || |||| ||| || | || || || ||| Sbjct 833322 AGGTGAAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGCCCGTCCTCGAGC 833381 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || || || || | ||| ||||||||||| || | || ||||||||||| ||| Sbjct 833382 TGCTTCCCAGCAAAAATCAAGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGAATC 833441 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || || || ||||| ||||| || ||| |||||||| || || ||||||||| Sbjct 833442 TTCGCCTTGACATTGTCGATAGTGTCCGATGATTCGACCTCGAGGGTAATGGTCTTTCCC 833501 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || | ||||| Sbjct 833502 GTGAGCGTCTTGACGAAAATTTGCAT 833527 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| ||| || || |||||||| || ||| ||| ||||| Sbjct 834269 CCCTCCTTGTCCTGGATCTTGGCTTTGACATTGTCGATGGTATCGGAGGATTCGACCTCA 834328 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| |||||||| || | |||||| || || | |||||| Sbjct 834329 AGAGTGATGGTCTTTCCTGTCAAAGTCTTCACGAAAATCTGCAT 834372 Score = 91.5 bits (100), Expect = 3e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || ||||| ||||| ||||||||||| || ||||| || || | ||||| Sbjct 834101 CGAAGACGGAGCACAAGATGAAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAGAGGGTA 834160 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 | |||||||| |||||||| || || ||||| || || |||||||| || || Sbjct 834161 CGCCCATCTTCGAGCTGCTTCCCGGCAAAGATCAGACGCTGTTGGTCGGGCGG 834213 >seq1 Length=2331425 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || |||| ||||| | ||||| Sbjct 482153 AGAACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGATAGGGTGCGACCATCC 482212 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || || || || |||||||| ||||| |||| ||||||||||| Sbjct 482213 TCAAGCTGCTTGCCGGCAAAAATGAGACGTTGTTGATCAGGCGGAATCCCTTCCTTGTCT 482272 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || ||||| ||||| || || ||| ||| || ||||| ||||| ||| Sbjct 482273 TGGATTTTCGCCTTGACGTTGTCGATAGTATCGGAGGATTCGACTTCGAGGGTGATGGTC 482332 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || || || | |||||| Sbjct 482333 TTGCCTGTCAGAGTTTTGACGAAGATCTGCAT 482364 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| ||||| | ||| || | || || Sbjct 482381 AGAACGAGGTGGAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTTCGGCCGTCC 482440 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| ||||| || ||||| || || || ||||||| || ||||| ||| Sbjct 482441 TCGAGTTGCTTGCCGGCGAAAATTAGGCGCTGCTGATCGGGAGGAATGCCCTCCTTATCC 482500 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || |||||| || || || ||||||||||| || || || || || ||||||||| Sbjct 482501 TGAATCTTTGCCTTGACATTGTCGATGGTGTCGGAAGACTCGACTTCCAGCGTGATCGTC 482560 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| ||||| | |||||| Sbjct 482561 TTGCCGGTCAATGTCTTCACAAAAATCTGCAT 482592 Score = 116 bits (128), Expect = 9e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 |||||| ||| ||| || || || || ||||||| | || | || || |||| || Sbjct 481933 GTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCAATTG 481992 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 ||| || || ||||| ||||| || ||||||||||||| || ||||| ||||| ||||| Sbjct 481993 CTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAATCTT 482052 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 ||||| || || || || || || || || || | ||||||||||||||||| Sbjct 482053 CGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTCCCGT 482112 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 | |||||| || || | ||||| Sbjct 482113 CAAAGTCTTCACGAAGATTTGCAT 482136 Score = 116 bits (128), Expect = 9e-21 Identities = 88/104 (85%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| |||||||| || |||||||| || || | ||| || | ||||| Sbjct 482609 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGACCATCC 482668 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || |||||||| || ||||||||||||||||||||||| ||||| Sbjct 482669 TCAAGCTGCTTTCCAGCGAAGATAAGGCGTTGTTGGTCGGGAGG 482712 Score = 113 bits (124), Expect = 1e-19 Identities = 89/107 (83%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||||||||| |||||||| |||||||| |||||||| |||||| ||| |||||| Sbjct 483053 CCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTATCAGAGGATTCGACCTCG 483112 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||||| |||||||| ||||| ||||| || || | |||||| || Sbjct 483113 AGAGTGATGGTCTTTCCAGTGAGGGTCTTCACGAAGATCTGCATGTT 483159 Score = 96.9 bits (106), Expect = 8e-15 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| || ||||| || || |||||||| || | ||||| | ||| || Sbjct 482893 AGGACAAGGTGAAGGGTCGACTCCTTCTGAATGTTATAGTCAGATAGGGTTCGTCCGTCC 482952 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTC 211000 || |||||||| || ||||||||||| ||||| ||||| Sbjct 482953 TCGAGCTGCTTTCCGGCGAAGATAAGACGTTGCTGGTC 482990 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 |||||||| ||||||||||| ||| || || || |||||||| || ||||||||| Sbjct 482773 CCTTCCTTATCCTGGATCTTGGCTTTGACATTGTCAATGGTGTCCGATGACTCAACCTCG 482832 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || |||||||| || ||||| ||||| || || | |||||| Sbjct 482833 AGGGTAATCGTCTTCCCAGTGAGGGTCTTGACGAAAATCTGCAT 482876 >seq69 Length=731732 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| ||||||||||| ||||||||||| || || ||||| | ||||| Sbjct 268741 AGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCATCC 268800 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 |||||||||||||| |||||||| || || || ||||| ||||| Sbjct 268801 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCGGGAGG 268844 >seq284 Length=318945 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 ||||||||||| ||||| ||| || ||||| |||||||||||||| || ||||| Sbjct 114346 CCTTCCTTGTCTTGGATTTTTGCCTTGACGTTGTCGATGGTGTCAGACGACTCCACCTCA 114287 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||||||||| |||||||| ||||| || || | ||||| || Sbjct 114286 AGGGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCATCTT 114240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146950444100