Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypsizygus_20marmoreus_20[genbank_20GCA_5F001605315.1_202016-03-31] 340 sequences; 41,626,055 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq113 102 7e-17 seq1 91.5 1e-13 >seq113 Length=2004859 Score = 102 bits (112), Expect = 7e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || |||||||||| ||| || || |||| || ||||| |||||||| || Sbjct 833619 CTCCTTCTGAATGTTATAATCGGAAAGAGTGCGCCCGTCCTCGAGCTGCTTGCCCGCGAA 833678 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || | |||||||||||| | ||| | | ||| |||||| ||| || ||||| ||| Sbjct 833679 GATCAAACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTTGCTTTGA-CGT 833737 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAA 39271 | | | || ||| |||||| || || | || ||| | || || || || || || | Sbjct 833738 TGTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATAGTCTTCCCAGTGAGGGTCTTGA 833797 Query 39272 CAAAGATTTGCAT 39284 ||||||| ||||| Sbjct 833798 CAAAGATCTGCAT 833810 >seq1 Length=2331425 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 39077 CCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAA 39136 |||| || || |||||||| || || ||||| ||||| | | || || |||| || | Sbjct 481929 CCAAGTGAAGGGTGCTCTCCTTCTGAATATTGTAATCCGACAAAGTACGCCCGTCCTCCA 481988 Query 39137 GCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGA 39196 || || || ||||| || || ||||||||||| | || | || ||| || ||| | Sbjct 481989 ATTGCTTCCCGGCAAAGATGAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGAA 482048 Query 39197 TTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTC 39256 | ||| || | | | | |||||| ||||| || |||| |||||| | |||| Sbjct 482049 TCTTCGCCTTCACATTGTCAATCGTATCCGAAGACTCGACTTCCAACGTGATCGTCTTTC 482108 Query 39257 CCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||||| || || || ||||||||||| Sbjct 482109 CCGTCAAAGTCTTCACGAAGATTTGCAT 482136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429543820070420